Peredibacter starrii: SOO65_10290
Help
Entry
SOO65_10290 CDS
T09598
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
psti
Peredibacter starrii
Pathway
psti02020
Two-component system
psti02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOO65_10290
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SOO65_10290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psti03021
]
SOO65_10290
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psti02035
]
SOO65_10290
Transcription machinery [BR:
psti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SOO65_10290
Bacterial motility proteins [BR:
psti02035
]
Flagellar system
Flagellar assembly proteins
Stator
SOO65_10290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
WPU67142
UniProt:
A0AAX4HV16
LinkDB
All DBs
Position
complement(2021757..2022461)
Genome browser
AA seq
234 aa
AA seq
DB search
MEPKLNPQETSRQEIIKNFMPTIRYWAKHYHYQYHQVLEFEDLVMVGIIGLIDAMNKYKK
DKQNQFKTYAEFRIRGEIIDELRKQDWMTRSERNKQKKYKRAKNNLTEELGRAPTSVEMS
NVLPFKSKDMIRLEQYESGDTIKQYVEGETVSKGNLENSEFENYSLKKTLAVVMDELPRT
MRLIVTLKYFEDLNFFEISKVVNLSEGRICQLHAEALDMLKNHIENQKIDILAA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtggaaccaaaactaaatccccaagagacttctcggcaggaaatcataaaaaatttcatg
cccaccatccgttactgggccaagcactatcactaccaatatcaccaggtcttagaattt
gaggacttagtgatggtcggaattatcggacttatagatgccatgaataagtataagaaa
gataagcaaaatcaatttaaaacctacgctgaattccgtatccgtggggaaatcattgat
gagcttcgtaaacaggactggatgacccgttctgagcgtaacaagcagaagaagtataaa
cgcgctaaaaacaacctgactgaagagttgggtcgcgcgcctacctcggtggagatgtca
aacgtgctgccgtttaaatcgaaagatatgatccgtcttgagcagtacgaaagtggcgac
accatcaagcaatacgttgagggtgaaacggtttcaaaaggtaatcttgaaaactctgag
ttcgagaattactcgctcaagaaaacactcgcagtggtaatggatgaacttccacgtacc
atgagactgattgtaactttaaaatactttgaggacttaaacttctttgagatctcgaaa
gttgtgaacctatctgagggtcgtatttgtcagcttcacgctgaggccctggatatgttg
aagaatcatattgagaatcaaaagatcgatattcttgccgcttaa
DBGET
integrated database retrieval system
