Peredibacter starrii: SOO65_10780
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Entry
SOO65_10780 CDS
T09598
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psti
Peredibacter starrii
Pathway
psti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOO65_10780 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psti03019
]
SOO65_10780 (pnp)
03016 Transfer RNA biogenesis [BR:
psti03016
]
SOO65_10780 (pnp)
Enzymes [BR:
psti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SOO65_10780 (pnp)
Messenger RNA biogenesis [BR:
psti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SOO65_10780 (pnp)
Transfer RNA biogenesis [BR:
psti03016
]
Prokaryotic type
tRNA degradation factors
SOO65_10780 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH_2
KH_KhpA-B
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WPU63169
UniProt:
A0AAX4HIU7
LinkDB
All DBs
Position
2121132..2123255
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AA seq
707 aa
AA seq
DB search
MLNNKKEFKMNYGGKEITLETGRLAKQADAAILASCEGTQVLVTLTCAKEVNDGQDFFPL
LVDYKEKFYAAGKFLGGFLKREGRPSNAEILIMRLIDRPLRPLFPEGFMNETILMAQVVS
QGAGDSEVLAGLGAAAALAISDVPFNGPMGYAKVGKVDGKLILNPTKAEWDAGALGLLVA
GSAEAVLMVEGESNEVSEAEMLEAIVFGHNNIKEFCKLLDKMTKEVGVKKREFTPVTPNA
ALMTAAMSEFSTEARKVLSTNVKQERSNATNAFRKHIKEALKANPAKFGLTEETDFGKEA
AKVTDEVLYKMMRADILNENKRIAGRGLAVVRAIETETSVLNSVHGSALFTRGETQVLAA
VTIGGKEGEQMYDSIHGVGYDKFYLHYSMPPFSVGEAKGYRGVGRREIGHGNLAERALKK
AMPSQTEFPYTVRVACEVLESNGSSSMGSVCSGSMALMDAGVPLKGPVAGVAMGLIKEGD
KYKILTDILGDEDHLGDMDFKLAGTAAGITAIQMDMKIAGISEQIFREALAQAKEGRTHI
LGEMAKTISTNRIGFKAGVPQIKSFKIAPDKIGALIGPGGKNIKALQENFKVTMDVAEDG
TVKVLGVDVQKIDEVIALADMQLNGPKIGAIYKGTVVTIKEYGAFVDIVPGLAGLVHVSE
IADERVNDPNDYLTEGQLLDVKVLEVDRFGKIKLSAKAVAPVAKKAK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataacaaaaaagaattcaagatgaattacggtggtaaggaaatcaccctcgag
actggtcgtcttgctaagcaagcggatgctgcaatcctcgcttcatgcgaaggcacgcaa
gttcttgtgactcttacttgcgcaaaagaagtaaatgatggccaagacttcttcccactt
cttgttgactataaagaaaaattctacgctgccggaaaattccttggcggtttcttaaag
cgtgaaggtcgtccatcaaacgcagaaattctaatcatgcgtcttatcgaccgtcctctt
cgtccgcttttcccagaaggcttcatgaacgaaacaatccttatggcacaagttgtgtct
caaggtgctggtgattcagaagttctagctggtctaggagctgcagcagctctagcgatc
tcagacgttcctttcaatggaccaatgggttacgcaaaagttggtaaagttgatggtaaa
cttatccttaacccaacgaaagctgagtgggacgctggtgcccttggtcttctagttgct
ggttctgcagaagcagttcttatggttgaaggtgagtcgaatgaagtttcagaagcagaa
atgcttgaagcgatcgtattcggtcacaacaacattaaagaattctgtaagcttcttgat
aaaatgacaaaagaagtaggcgtgaagaagcgtgagttcactcctgtgactccaaacgct
gctcttatgacagctgccatgagcgagttctcaacagaagctcgtaaagttctttcaact
aacgttaagcaagagcgttcaaatgctacaaacgctttccgtaagcacattaaagaagct
cttaaagcaaatcctgctaaatttggtctaactgaagaaacagatttcggtaaagaagca
gctaaagttactgacgaagttctttataaaatgatgagagctgacattcttaacgagaac
aagcgtatcgctggccgtggtctggcagttgttcgtgcaattgaaactgaaacttcagtt
cttaattcagttcacggttctgcacttttcacacgtggtgaaactcaagttcttgctgcc
gttacaatcggtggtaaagaaggcgagcagatgtatgactctatccacggtgttggttat
gataaattctaccttcactactctatgccaccgttctcagttggtgaggcgaaaggttac
agaggtgttggccgtcgtgaaatcggtcacggtaaccttgctgagcgcgctcttaaaaaa
gcaatgccttctcaaacagaattcccatacacagtacgtgttgcctgtgaagttctagaa
tcaaacggttcttcttcaatgggttcagtatgttctggttcaatggcgcttatggacgct
ggtgttcctcttaaaggaccggttgctggtgtggccatgggtctaatcaaagaaggcgac
aagtataagatccttacagacatccttggtgatgaagatcaccttggtgatatggacttc
aaacttgctggtacagctgctggtattactgcaattcaaatggatatgaaaattgctggt
atctctgagcaaatcttccgcgaagctcttgctcaagcgaaagaaggccgtactcacatt
cttggcgagatggcgaaaactatctctacaaaccgtattggtttcaaagccggtgttcct
caaatcaaatcgttcaaaattgctccggataaaatcggcgctcttattggacctggtggt
aagaacattaaagcccttcaagaaaacttcaaagttactatggatgttgctgaagacggt
acagttaaagttcttggtgttgacgttcagaagatcgatgaagttatcgctcttgcggac
atgcaacttaacggtcctaagatcggtgcgatctacaaaggtactgttgttacaatcaaa
gaatacggcgcattcgttgatatcgttcctggacttgctggtcttgtgcacgtttcagaa
atcgctgatgagcgcgtgaatgatccgaatgattacctaactgaaggtcaacttctagat
gttaaagttcttgaagtagatcgttttggcaaaatcaagctttctgctaaagcagtagct
ccggttgctaaaaaagcgaagtaa
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