Peredibacter starrii: SOO65_12065
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Entry
SOO65_12065 CDS
T09598
Name
(GenBank) PLP-dependent decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psti
Peredibacter starrii
Pathway
psti00300
Lysine biosynthesis
psti00470
D-Amino acid metabolism
psti01100
Metabolic pathways
psti01110
Biosynthesis of secondary metabolites
psti01120
Microbial metabolism in diverse environments
psti01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SOO65_12065
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SOO65_12065
Enzymes [BR:
psti01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SOO65_12065
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WPU63423
UniProt:
A0AAX4HJN1
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Position
2380366..2381556
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AA seq
396 aa
AA seq
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MNRTDHVREVISRFQSSFYFYDLDQFEAHIQSIKAILHPDVRVWYATKANPLSEILRILN
KNGFGADVASMGELQQARNSGFGPKNLIATGPAKTKSYLARLLETDVEAIVIESINQLKD
LNEIAGKLGRKQDVLLRVQLEWEGDKSILGGSAITPFGLGVSDWQDVNLANFKNVNVMGV
HCFQWGNVLDLDKLRAVWEHTVEVCQKMSHGMGFEMKVIDLGGGLGLSYKDERELHFSDV
HALLMEIKSKYELQKIWLELGRFSIGKFGSYFTRVVDVKTVRGENLVVTEGGINHMARPA
LVGESFPCEAFMNQETSLSRYQVHGPLCTALDNLGTFQLPSNLKPGDWLEFKRAGAYGFS
ESMPYFLCHNLVGEAILYQGELMVPRVPKTNLEWMV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaactgatcacgtcagagaagtcattagccgtttccaatcgtctttttacttt
tacgaccttgatcagttcgaagctcatatccaaagcattaaagcgattcttcatccggat
gttcgcgtgtggtatgccactaaagcgaatcccttatctgaaatcctacgcatcttaaac
aagaatggtttcggtgctgatgtggccagcatgggtgaacttcaacaggcgcgcaattct
ggtttcggtccgaagaacttaattgccactggtcctgcgaaaaccaaaagctatctcgca
aggcttttggaaactgatgttgaggccatcgtcattgaaagtattaatcaattaaaagat
ctgaatgaaattgctggaaaattgggccgcaaacaagacgttttgttacgggtgcagctt
gaatgggaaggcgataaaagtatactcgggggatctgctattactcctttcggtttggga
gtgagtgattggcaggacgtgaacctcgcaaatttcaagaacgtaaatgtgatgggtgtt
cattgtttccaatggggcaatgttcttgatctggataaacttcgcgctgtctgggaacac
accgtggaagtttgtcagaagatgtctcatggaatgggttttgaaatgaaagtcattgat
ctgggtggtggcctgggtctgtcttataaagatgagcgtgagcttcatttttcagacgtt
cacgctctcttaatggaaatcaaatctaaatacgaactacaaaaaatctggctcgagctc
gggcgtttttccattggaaaatttggttcttatttcacacgtgtggttgatgtaaaaact
gttcgtggtgaaaacctggtggtcactgaaggtggtattaatcacatggcacggcccgca
ttggtcggggaatcttttccttgtgaggcatttatgaaccaggagacatctttgtctcgc
taccaggttcatggaccgctttgcacggccctggataatttaggaacgtttcaattacct
tcaaatttgaaaccaggggactggttagaatttaaacgagcaggggcctatggtttctcg
gagagtatgccctacttcctgtgccataacttagtaggcgaggccatcctgtatcagggc
gagcttatggttccaagagttcccaaaacaaaccttgagtggatggtctag
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