Peredibacter starrii: SOO65_12655
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Entry
SOO65_12655 CDS
T09598
Name
(GenBank) 2'-5' RNA ligase family protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
psti
Peredibacter starrii
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psti03016
]
SOO65_12655
Enzymes [BR:
psti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SOO65_12655
Transfer RNA biogenesis [BR:
psti03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SOO65_12655
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Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
AKAP7_NLS
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
WPU63539
UniProt:
A0AAX4HJW7
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All DBs
Position
complement(2491172..2491690)
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AA seq
172 aa
AA seq
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MKFFLGLDVSELKLDLKKLKVNLSKGKNFEFQWLPEDQRFVPLIGLEEMEDNLLRQIAEE
TSIFTLKFEGMSAYPEPKKARLLWVGVQNSKEVRALFDRIVETLKIQPESEFKPYLPVVR
LRNHREVSDLLSPHKNTDFGKFTISRLVLYEMTSVGAFPTYAKRGEYPLKVE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctttttaggtctcgatgtaagtgaattgaagttggatcttaaaaaactgaag
gtgaacctcagtaaggggaagaattttgaatttcaatggcttccagaggatcagcgtttt
gttcctctcattggtctggaggaaatggaggataatctcttaaggcaaatcgcggaggag
acttcaatttttaccctgaagtttgaggggatgtcggcctatccagaacctaaaaaggca
agactcttatgggttggtgttcaaaattcaaaagaagttcgggccctctttgacagaatt
gttgaaaccttgaagattcaaccagaaagtgaatttaaaccttacttacctgtagtccgt
ttaagaaatcaccgtgaggtcagtgatcttctctctcctcataaaaatacagacttcggg
aaattcactatttctagattggttttatatgaaatgacttctgttggtgcatttcctacc
tatgccaaacggggcgaatatccattaaaagtcgagtga
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