Peredibacter starrii: SOO65_13255
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Entry
SOO65_13255 CDS
T09598
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psti
Peredibacter starrii
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psti03400
]
SOO65_13255
DNA repair and recombination proteins [BR:
psti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SOO65_13255
Archaeal homologous recombinant proteins
SOO65_13255
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Ortholog
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GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Microp_apicomplexa_7
Motif
Other DBs
NCBI-ProteinID:
WPU63656
UniProt:
A0AAX4HK97
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All DBs
Position
2620207..2621349
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AA seq
380 aa
AA seq
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MRILHTSDWHLGKRLFKLDRSPEHELFLNWLLSILREEKIDVLLIAGDIFDTPTPPHQSL
EVFYNFLHRVSTETTTDTYIIAGNHDSGLLLEAPARLLSFHRVKIWGKLSTEIKDHWINI
TKGKESIDLCALPFFRSYELLPQGEGDALAVLKTYLEPQSKNPSILMLHHLAGVFEAAGS
EQVISLSGVDSIPTEVMDRFDYVALGHIHKPQKVGKKSYYSGSPIPMRFSETQRKSVMII
DVKDSEFEIKTHQIPVFRDLFIVKADESTYLAKLKELIPSTELKGMVEVQLNLAAPRIGL
IDEIKEVLDKKGLELLSFLPFYAAKDDAPKKHEKLFELSPLELFQEFYATKFPEEKEVPE
DLKADFTELLEKVKHAPHSS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaggattcttcacacatcggactggcaccttggtaaaagactctttaagctcgatcgc
tcaccagaacacgaattatttttaaattggctcctctcgatccttcgagaggagaaaatt
gatgttctcctgattgctggagacatcttcgatacgccaactcccccacatcaaagcttg
gaagttttttataatttccttcatagggtttcgacggaaaccacgactgatacctatatc
atcgctggtaaccacgattctggacttcttctggaagctccagctcgattactttcattt
caccgagtgaaaatttggggaaaactttcaactgaaatcaaagatcattggatcaacatc
accaagggcaaggagagcattgatctctgcgcacttccatttttccgctcttatgaatta
cttccacagggcgagggtgatgcactggccgtgcttaaaacgtatcttgaaccacaatcc
aaaaatccatcgatcctgatgcttcatcaccttgccggtgtttttgaagctgccgggtct
gagcaagtgatctctcttagtggtgtggattcaattcctactgaggtcatggatcgattt
gattatgtggcgctgggacacattcataaaccacaaaaagtcggaaagaagagttactac
tcaggctctcctattcccatgcgcttctctgagactcaaagaaagtcagtgatgatcatt
gatgtaaaagactcagagttcgagattaagactcatcagattccggtctttcgagatctc
ttcatcgtgaaagcggatgaatcaacctatctcgcaaaattaaaagagctcattccatca
actgaattaaaaggcatggtggaagtgcagctcaatctcgcggccccacgtattgggctg
attgatgagattaaagaagtcctggataagaagggacttgagcttttatcgttccttccg
ttttatgcggccaaggacgatgctcctaaaaaacatgagaagctctttgagctctctccc
ctggaacttttccaggaattttacgccaccaaatttccggaggaaaaagaagttcccgag
gaccttaaggccgatttcactgaactcttagagaaggttaagcatgcgcctcattcgtct
tag
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