Peredibacter starrii: SOO65_13665
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Entry
SOO65_13665 CDS
T09598
Name
(GenBank) exonuclease domain-containing protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psti
Peredibacter starrii
Pathway
psti03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SOO65_13665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psti03019
]
SOO65_13665
03009 Ribosome biogenesis [BR:
psti03009
]
SOO65_13665
Messenger RNA biogenesis [BR:
psti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SOO65_13665
Ribosome biogenesis [BR:
psti03009
]
Eukaryotic type
Pre-60S particles
RNases
SOO65_13665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF2950
Motif
Other DBs
NCBI-ProteinID:
WPU63737
UniProt:
A0AAX4HKN0
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All DBs
Position
2727225..2727818
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AA seq
197 aa
AA seq
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MKYLSIDIEATGLAENCQIIEFAMIPFDTQFKRLEDSLARTMYIHCPSFEDLKPTLDPWV
REHNEKIIRKAHSEGMMLSEFKEFLKNYLESKEVREYFNNQKIVLFGKSMTAIDLPFLTR
DLGWDFMRKYFHHRNLDLSGVGYSLIDLGMLPQGMDSGSNLMNHLGMGEVAHTALEDAKN
TAIMYLKLLEKYEAKKS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctaagcattgatattgaggccacgggtctcgccgagaactgtcagatcatc
gaattcgcgatgattcctttcgatacacaatttaagcgcctggaagactctctcgctcgc
acgatgtatattcattgtccttcttttgaagatctaaaaccgactctcgatccttgggtc
cgtgaacataatgagaaaatcatccgcaaagctcactctgaaggaatgatgctttctgag
ttcaaagagtttttgaagaactacctcgaaagcaaagaagtgcgcgaatacttcaataac
caaaaaatcgttctctttggtaagtcgatgacggcgattgatcttccgttcctgactcgc
gatttgggttgggatttcatgcgtaagtatttccaccaccgaaaccttgatctctctggg
gttggttacagcttgattgatttgggaatgcttcctcaggggatggattcaggatcaaac
cttatgaatcacctgggcatgggcgaagtggcgcatactgcacttgaggatgcgaagaat
actgccatcatgtacttgaagcttctggaaaaatacgaggcgaagaagtcttag
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