Peredibacter starrii: SOO65_14055
Help
Entry
SOO65_14055 CDS
T09598
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psti
Peredibacter starrii
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psti03009
]
SOO65_14055 (ycaO)
Ribosome biogenesis [BR:
psti03009
]
Prokaryotic type
ribosomal protein modification factors
SOO65_14055 (ycaO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
WPU63814
UniProt:
A0AAX4HKP8
LinkDB
All DBs
Position
2806607..2808364
Genome browser
AA seq
585 aa
AA seq
DB search
MTKTMILGKDAALEDTISRLKGLLLDWGFDVEEASWLNPVPNVWSVHIRDRYCPYLFTNG
KGTSKEAALASALGEFFERLNCNYFFADYYLGEQVANSEFVHYPQEKWFPFTESMPKGLM
NESLWKFYDSDNDLRPVDLVDTNSGNIERGICALPYTQVADGKTYYIPMNIVGNLYVSNG
MSAGNTKTEARVQALSEIFERSIKHQILSEGISLPNIPEEVLNRYPKVVEAIRELETHGF
PIICKDASMGGKYPVISVTLLNPKEGTAFASFGAHPKFEVALERTLTELLQGRRLDQLNV
FSPPSFELDDVKDHLNIEAHFIDSSGLIHWNFFKETPDFPFSDWNFGGATTESEYQALIG
IFHEMEKDVYIMDFEHLKVYGCRIHVPGVSEIYPAIDLTWDNNNSCNSIREKILSCHELS
QDELIELHNEIENKGLEDMLLVSHAIGVIPDADTVWADLRFGEFKAMLALAAKDHELSKA
GIDWSLHFAPLKQERRLLYMCLQTLLQMEMDDTLNTNEYLPTVEKIYGKEMVDRAQKLID
GFEKFDGLHESDLSLKGFDMHQKLITSYEKLQRAKRIWAENNRTK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaactatgattctgggaaaagatgcggccttagaagatactatttctcgtctg
aaaggactccttttagactggggcttcgatgttgaagaggcatcctggttaaatccagtc
cccaatgtctggtcagttcatattcgcgatcgttattgtccttatctcttcaccaatgga
aaaggcacaagcaaagaagcggccctcgccagtgctctaggtgaattctttgagcgctta
aactgtaactacttttttgctgactattatcttggtgaacaagtcgctaattctgagttc
gttcattatccgcaagagaaatggttccccttcacggagtctatgccaaaaggcctcatg
aatgaatcactgtggaagttctatgattcagataatgatctgaggcccgttgatttagtt
gataccaactctggaaatatcgaacgcggcatctgcgctcttccctacactcaggttgct
gatggaaaaacttattacatccccatgaatattgtggggaatttgtatgtgtccaatggc
atgtcggccggtaatacaaaaacagaagcgcgggttcaggccttgtctgaaatctttgaa
cgctcgatcaagcatcaaattctgtctgagggaatttcacttccaaatattccggaggaa
gtcttaaatcgttatcccaaagttgtggaagcaatcagagaactcgagacccatggattt
ccgattatctgcaaagatgcatcgatgggtggaaaatatcccgtgataagtgtcacccta
ttaaatcctaaagaaggaaccgcattcgcttcatttggtgctcatccaaaatttgaagtg
gcacttgagagaaccttgacggaacttcttcaaggtcgccgacttgatcaacttaacgtt
ttctctcctccgagttttgaacttgatgatgtaaaagatcatttaaatattgaggcccat
tttattgattcaagcggactcattcattggaacttttttaaagaaactcccgactttcca
ttctcggactggaactttggtggagcgacaacagaatccgagtatcaggcactgattggg
attttccatgagatggaaaaagacgtctacatcatggactttgaacacctgaaagtttac
ggatgtcgcattcatgtaccgggtgtttcggaaatttatcccgccattgatctcacgtgg
gacaataacaattcatgtaacagcattcgtgagaaaattctgagttgtcatgaactctcg
caggatgaattgattgaacttcataatgaaatcgaaaataaggggctcgaggacatgctt
ctcgtgagtcatgccattggagtgattcctgatgctgatacagtgtgggccgatcttcgt
tttggagaatttaaagcgatgctcgccttggcagcaaaagaccatgaactttccaaagca
ggaattgattggagccttcactttgctcctttaaaacaagagagacgtctcctttatatg
tgccttcagactctccttcaaatggagatggatgatacgcttaatacgaatgaatatctc
ccgacagtggagaagatctatggtaaagagatggtcgatcgagctcagaaacttatcgat
ggttttgagaagtttgacggacttcacgaatcagacctaagcttgaagggctttgatatg
caccagaagctcattacttcttatgagaagctacaaagagcaaagagaatctgggcggag
aacaacagaacgaaatga
DBGET
integrated database retrieval system
