KEGG   Peredibacter starrii: SOO65_14235
Entry
SOO65_14235       CDS       T09598                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
psti  Peredibacter starrii
Pathway
psti03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:psti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SOO65_14235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psti03400]
    SOO65_14235
DNA repair and recombination proteins [BR:psti03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SOO65_14235
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: WPU63850
UniProt: A0AAX4HKR9
LinkDB
Position
complement(2853878..2854762)
AA seq 294 aa
MAGSIWKGSISFGLLNIPVSLQKAQEGNDLHFSMLDGKDLSPIKYKKVSGKDGKEVPWNR
IVKGYEYEKGQFVIIDKDDFKRANPKATQTIDIEDFVDLEEIDPMFLEKPYYLVPQKNGI
KGYFLLAEALKKSRKVAIAKVIIRTKQHLGAIMTRGDYLILEILRFSHEVLEVDEVEYLS
DIQRPKFSAKEVKMAQELIDGMTGKWKPEQYKDTYNDDIMKIINLKIEAGEGKEVDLGEI
PKAEKGNTGVVVDLMPLLKKSLEEKKKAKSSTSSRAAPASKKKTAKKTARKRAS
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcaggaagcatatggaaagggtctattagttttgggctactaaacattccagtttct
cttcaaaaagcgcaagaagggaatgatctgcatttctccatgttagatggaaaagattta
tccccgattaaatataaaaaagttagcggtaaggatgggaaggaagttccctggaacaga
attgtgaagggatatgagtatgagaaaggacagttcgttatcatcgataaagatgatttc
aaacgtgctaatcctaaggccactcaaacgatcgatatcgaagatttcgttgatctggaa
gagattgatcctatgtttctagagaagccttattacctcgttcctcagaaaaacggaatt
aagggatacttcttacttgctgaggccctgaaaaaatcccgcaaagttgccattgctaaa
gtcatcatccgtaccaaacaacatcttggtgcgatcatgacccgaggtgattatctcatc
ctggaaatactaagattctcacatgaagtcctggaagtggatgaggttgagtacctaagt
gatatccagcgaccaaagttttccgcaaaagaagttaagatggcccaagagttgattgat
ggaatgactggtaaatggaaacctgaacaatataaagacacctacaatgacgacatcatg
aagatcatcaatcttaaaattgaggccggtgaaggtaaggaagttgatctgggtgagatt
ccaaaggcagagaaaggaaataccggtgtggttgtggaccttatgccactattgaagaaa
tcgctggaagaaaagaagaaggcaaagtcgtctacctcttctagggcagcaccggcatca
aagaaaaagaccgccaagaaaaccgcacgtaaacgagcgagttaa

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