Peredibacter starrii: SOO65_17800
Help
Entry
SOO65_17800 CDS
T09598
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psti
Peredibacter starrii
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psti03009
]
SOO65_17800
Ribosome biogenesis [BR:
psti03009
]
Prokaryotic type
ribosomal protein modification factors
SOO65_17800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
OsmC
Motif
Other DBs
NCBI-ProteinID:
WPU64550
UniProt:
A0AAX4HMY9
LinkDB
All DBs
Position
complement(3558695..3560881)
Genome browser
AA seq
728 aa
AA seq
DB search
MQVNVRFLENLRLEASFDDFKVISDQPIRYKGDGTAPSPFDYFLASSALCAAYFVKVYCV
ARDIPTDDIKVSQNNIVDPENRYNQIFNIEIELPASISDHDREGILKAMDRCTVKRVIQN
NPGFKINPKDVLGKDSNLVLEHVGLTETKTMIIGKDSSLEDTIVKLTGLLESLGIKIEIA
SWRNPVPHVWSVHIRDADSPMCFTNGKGATKNAALCSALGEYLERISTNYFYSDYFLGKE
IAEGDFVHYPNEKWFKAGPKDSIPKDLMDENFLRAYGNDGELKLSHLYDTNSGNKERGVC
AIPFVRQSDKKTVYVPVNLIANLYVSNGMSAGNTVHEARVQALSEIFERAVKNEIISNEL
CLPDVPKEVLARYPKIIEGIQKLEEQGFPVLVKDASLGGRFPVMNVTLMNPRNGGVFASF
GAHPNFEVALERTLTELLQGRSFEGMNDLIPPTFNEFAVRESNNIVDHFIDSTGVISWKF
FSEKSDYEFADWNFSGTTEQEFNYLMGILKEMEKEVYIADYEELGGKATRILVPGYSEIY
SSEELIWDNHNKALDFREDILNLHSLDNKALKNLVKKLEESEIDNYTTIPELIGIAFDEN
SIWGQLTIGELKALSYVSLKKFEEAKDLVENLTTFSNSLPDRKKFYQALNVVLDIEINEE
LELADYLPNLTRMYGEKVMEAVTKSVSGEIKFFGLQPTNTSLEGIDKHIKFVESYQKLQK
AKRSFHNA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaacgtaagattcttagaaaacctcagacttgaggcaagttttgatgacttc
aaagtcatctcagatcaacctattcggtacaaaggcgatggcacggcccctagtcccttc
gactactttttggcctcttcggccctgtgcgcggcctactttgtaaaagtctattgtgtc
gctcgcgatataccgacagacgatatcaaagtctctcagaacaatatcgttgatccagaa
aaccgttataaccaaatcttcaatatcgaaattgaacttccggccagcatttctgatcat
gatcgtgaaggtattttgaaggcgatggacagatgtactgtaaagcgcgtgattcaaaat
aatcctggctttaagatcaacccaaaggatgttttgggtaaagattcaaatctcgtttta
gagcatgttggtttaactgaaaccaaaacaatgatcatcggaaaggattcttctcttgaa
gacacaatcgtaaagctcactgggctattagaaagtcttgggatcaagattgaaatcgct
tcctggagaaatccggttcctcacgtttggtctgtgcatatccgtgatgctgattctcca
atgtgctttaccaacggtaagggtgccactaagaacgccgctctttgttctgctctcggc
gaatatttagagcgaattagtaccaactatttctacagtgattattttctaggaaaagaa
attgctgaaggcgatttcgtacactatccaaatgaaaaatggttcaaggccgggcctaaa
gattctattcctaaagatctgatggatgaaaacttccttcgtgcctatggcaatgatgga
gaacttaagctgtcccatctctatgatacaaattctggcaataaagagcgtggtgtatgt
gccattccatttgttcgtcagtcagataaaaagaccgtttacgttccggtaaacctaatt
gcgaatctttatgtcagtaatggtatgagtgcaggcaatacagttcatgaggcccgtgtt
caggcactatctgagatttttgaacgtgcggtgaaaaacgaaattatttcaaatgagttg
tgtcttccggacgtcccgaaagaagtcctcgcccgttatccaaaaattatcgaaggtatt
cagaaattagaagaacagggcttcccggttctggtgaaggacgcttccttaggtggtcgt
ttcccggtgatgaatgtaactttgatgaacccaagaaacggaggcgtctttgcttcgttt
ggtgcacatccaaattttgaagtggcgcttgagcgaacgctcactgaactacttcagggc
agaagctttgaaggaatgaatgacctgattccaccgacattcaatgaatttgctgtaaga
gagtcgaataatatagttgatcatttcatcgattcaaccggtgtgatctcctggaagttt
ttcagtgagaaatcagattatgaatttgcggattggaacttttctggaactacggagcaa
gaattcaactacctgatgggcatcttgaaagagatggagaaggaagtttatattgcggat
tacgaagagctaggtggaaaggccacacgtattctggttcctggctactctgagatttat
tcgtcagaagagcttatttgggacaaccacaataaggccctggacttccgtgaagatatt
ttaaaccttcactctctggataataaggccctcaagaatctggttaagaagcttgaagag
tctgaaatcgataactatacgaccatcccagaacttattggaattgcctttgatgagaac
tcaatctggggacaactgacaattggggagctcaaggccctaagttatgtaagtctcaag
aagtttgaagaagcaaaagacctggtagagaacctaacgaccttcagtaatagtctccct
gacagaaagaagttttatcaggccttgaatgttgtcttagatatcgaaatcaacgaggaa
ctagaacttgctgactacctgccaaatcttactcgcatgtatggcgagaaggtgatggaa
gcagtgactaagagcgtatccggtgaaattaaattctttggtctacaaccgacgaatact
tctttagagggtattgataagcacatcaagtttgttgaaagctaccagaagcttcaaaaa
gcaaagagaagctttcataacgcctag
DBGET
integrated database retrieval system
