Peredibacter starrii: SOO65_19500
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Entry
SOO65_19500 CDS
T09598
Name
(GenBank) OB-fold nucleic acid binding domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
psti
Peredibacter starrii
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psti03019
]
SOO65_19500
Messenger RNA biogenesis [BR:
psti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SOO65_19500
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
Sialidase
Motif
Other DBs
NCBI-ProteinID:
WPU64884
UniProt:
A0AAX4HPJ5
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Position
complement(3886778..3887881)
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AA seq
367 aa
AA seq
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MTKLFISDLQGKEEIESVFLVKIFNVMEGKDGKKYFNIILTDSTGEMEARLWHYSAEIEK
NISKGTFVKVRGKVNFYQGRKQFIIAHIEKVEQNDVSLDDFVMKAVEDPEVMYKKLLNIV
DGLTDVYIRDLLRNIITDGEIARRLKIWQAGKSIHHAYRSGLLEHILSCTELALHLSKHY
KVNENYVVAGCILHDICKIYELTDGVNVEYTEEGKLVGHLVKGLEIVDRFSYKIKNFPHY
TKMHIKHILLAHHGEYEYGSPKIPQTSEAYLVHLIDLMDSKMGSFDIIRKTDNNTGHWSG
FVKHLDRIVYKSELPFYPEYIQEEEHHHEERQERPEPKREAPKPQRGQPEPKTSLGNMLS
GFKVDKP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaactttttatctccgatttgcagggtaaagaagaaattgaatctgttttcctg
gttaaaatcttcaacgtaatggaagggaaggacggtaagaaatacttcaatatcatcctg
actgactcaacaggggagatggaagctcgtctttggcattattcggctgagatcgagaag
aacatctcgaaggggacctttgttaaggttcgtgggaaggtgaatttctatcagggccgt
aagcagtttatcattgctcacattgagaaagtggaacaaaacgacgtgagcctggacgac
ttcgtgatgaaggcggttgaggatccggaagtgatgtacaagaagcttttgaacatcgtt
gatgggctgacagatgtttacattcgtgacctattaagaaatatcatcactgatggagaa
atcgctcgtcgtctgaaaatctggcaagcagggaagtcgattcatcatgcttaccgctct
ggtcttttagagcacatcctttcttgtacagaattggcacttcacctttctaagcattac
aaggtgaacgagaactacgtggtggccggttgtatcttgcacgatatttgtaagatctat
gagctgactgacggcgtgaacgttgagtatacagaagaaggaaaattggttggccacttg
gttaaggggctagagatcgttgatcgcttctcttataagattaaaaatttccctcactac
acaaaaatgcacattaaacatatcctcctggcccaccatggagagtatgaatacggatca
ccaaaaattcctcagacttctgaggcttacctagtgcacttgattgatctcatggattca
aaaatgggttcattcgatatcattcgtaagactgataacaatactggtcactggtctgga
tttgtgaagcacttggatcgtattgtttataagtctgagcttcctttctatcctgaatac
attcaggaagaagagcatcatcatgaagaaagacaagaacgtcctgagcctaagcgtgaa
gctcctaagccccaaagagggcagccggagcctaagacgagtttggggaatatgctgtct
ggatttaaggtcgataagccataa
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