Peredibacter starrii: SOO65_19600
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Entry
SOO65_19600 CDS
T09598
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psti
Peredibacter starrii
Pathway
psti00550
Peptidoglycan biosynthesis
psti01100
Metabolic pathways
psti01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SOO65_19600 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SOO65_19600 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psti01011
]
SOO65_19600 (mrdA)
Enzymes [BR:
psti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SOO65_19600 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psti01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SOO65_19600 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF2889
DUF1485
Motif
Other DBs
NCBI-ProteinID:
WPU64904
LinkDB
All DBs
Position
complement(3905535..3907514)
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AA seq
659 aa
AA seq
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MFGEEELVKIHKERAALMSYIITAAFGLVLARLWYLQVYKGETLHNYSIQNRLRKEVVWA
PRGLIYSRDDQLLVDNIPRFDAILTPQFLMEKEETLVKLSKMLSMDIESINTILKKNSNQ
AKYRPIILKKNISFGELAQIETQNADLPGISVDTFISREYRDKEIGAHLLGYISEISQTQ
LPKLRERDHADYRLGDFIGQFGIEEQLDKYLRGENGHEFVEVDARGRRKRYINTDNLFKG
IEDEKPLSGMNVKLTIDRDMQIAAFNALQDKVGGVIAIDINSGQVLAMVSRPSFDPSQFS
RGLTPEYWRSLVGNKEHPLRDRNIQEHFSPGSTFKAITGIAAFEEGEIDENTEVNCGGSF
RLGRKVYHCWKKEGHGPTNLVKAIRESCNVYFQKAANRMDIDVIAKYSKAFGLGARTGIS
LPREVNGLIPTKEWKKKRFGQEWQAGETLSCAIGQSYVLASTIQLATAYAAIANGGKIYR
PYVVKDIYDTEGELVKTFTPELLSSFEMKNPKTLKFVREGLFQVVNSPKGTAFYRRGQGI
LMAGKTGTSQVKSASADKVYAKCENMDYESRHHGLFVGFAPADNPKIAAAVIVEHGCHGS
SAATPVAEAVITQYMKKYHPDLYLQNLEKDKEIRENWVKSLRAAQPAKPKPAAEPAADE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtgaagaagaactggtcaaaatacataaggaacgagcggcgctgatgtcatac
atcatcacggccgcgtttggtttggtgcttgcgcgcttatggtaccttcaggtctataag
ggtgagacacttcacaactattcaattcaaaaccgtcttcgtaaagaagtagtgtgggcc
ccaagaggtcttatctattctcgagatgatcagttacttgtggataacatccctcgtttc
gatgcgattctgactccgcagtttttgatggagaaagaagagacgctggtaaaactttcg
aaaatgctttcgatggatattgaatcgatcaataccattttaaagaagaactcgaaccag
gcgaagtatcgtccgatcattcttaaaaagaacatctcgttcggagagttggcgcaaatc
gaaactcagaacgcggatcttcccggcatttcggttgatacatttatttcccgtgaatac
cgcgataaagaaatcggtgctcacttacttggctatatctcagagatttcccagactcaa
cttccgaaacttcgcgagcgtgatcatgctgattaccgcctaggtgatttcatcggtcag
ttcggaattgaagagcaacttgataaataccttcgtggtgaaaacggacacgagttcgtg
gaagtggatgcccgaggtcgtcgtaagcgttacatcaacactgataacttgtttaaagga
attgaagacgaaaagcccctgtctggtatgaatgtgaaactcacaatcgaccgtgatatg
cagatcgccgctttcaatgctcttcaggacaaagttggtggtgtgatcgcgatcgacatt
aactctggtcaggttctggcaatggtgtctcgtccaagctttgatccttctcagttctct
cgtggtttaacacctgagtattggagaagccttgtgggtaacaaagaacacccccttcgt
gacagaaacattcaggaacacttttcaccgggttcaactttcaaggccatcactggtatc
gccgcttttgaagagggcgagatcgatgagaacactgaagtaaattgtggtggttcattc
cgtttaggtcgtaaggtctatcactgctggaagaaagaaggtcacgggccaacgaacctt
gtaaaagcgattcgtgagtcttgtaacgtttacttccagaaggccgccaaccgcatggac
attgatgtcattgcgaagtactcaaaggccttcggtcttggtgcacgaacaggtatatca
cttcctcgtgaagtaaatggtcttatcccgacgaaagaatggaagaaaaagagattcgga
caagagtggcaagcaggggagactctatcatgtgccatcggtcagtcttacgttcttgct
tcaacgattcagctagcgactgcttatgcggcaattgctaacggcgggaaaatctatcgt
ccatacgttgttaaagatatctacgatacagaaggtgaactggttaagacgttcactcca
gaacttctttcttcttttgaaatgaagaacccaaagactctgaagtttgtacgtgaaggt
cttttccaagttgtgaacagcccgaaaggaactgcattttaccgtcgtggtcaaggtatc
ttgatggcaggtaagacaggtacttctcaggtgaagagtgcttctgcggacaaggtttat
gcgaaatgtgaaaacatggattatgaatctcgtcaccacggtctattcgtaggttttgct
ccggcagataatccgaagatcgcagcggcggtaattgtagagcacggatgtcacggttca
agtgctgcgactccagttgctgaagcggtaatcactcagtacatgaaaaaatatcatcct
gatctttatcttcagaacttagagaaagataaagaaattagagaaaactgggtgaagtct
ctacgcgcggcccaaccggccaagcctaaaccagcagctgaacctgctgctgacgaataa
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