Peredibacter starrii: SOO65_19735
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Entry
SOO65_19735 CDS
T09598
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
psti
Peredibacter starrii
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_3
AAA_16
AAA_19
AAA_2
TIP49
BBP1_C
MCM
nSTAND3
nSTAND1
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WPU64931
UniProt:
A0AAX4HNW2
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All DBs
Position
complement(3931440..3932954)
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AA seq
504 aa
AA seq
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MDDMNFLHQSFDGSSVMNFPPIIIVEDDKLLGLSLKKYLEQTLKLNVQLYSSSEDCLMNF
AKFHPKENPFCLVTDISLEQGSDGLLLIDILKDKGFEFVSIVMTGFASIETAIAATKKGV
FHYLTKPFEIENLKKLVIQALQTKLSTVLPREIVSEGEGVFAAGDRNKATSRLKIDRPTV
EDTFEGMIGRSKAMRDVFDRIQKVAKTDSTILIMGPSGTGKELVASAIHKLSSRNLKNRV
SVNCGAIPAELLESELFGHMKGAFTGAISNRKGRFELAQNGTIFLDEIGDMPQLLQVKLL
RVLQERQIEPVGSSENIDIDVRVIAATHRDLEKAVAEGKFREDLFYRLNVIPIKMPALKE
RREDIPLLISHFLDRFVSADRSNEISFAPLTMDLLMGYDWPGNVRELENVIERLVILRGG
NEILPEDLPAKIFRSNPLATHQYKTLFELPEIGVDLKQILSDIEDSLIMQAMNRTRGNKN
QASKLLALNRTTLIEKMKKKNLEL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggacgatatgaatttcctgcatcaaagttttgatggatcaagtgtcatgaatttcccg
cccatcatcatcgttgaagacgataagcttctgggactctcacttaaaaaatacctcgag
caaactctcaaattgaacgtgcagttgtattcaagctcagaagactgcctaatgaacttt
gctaagttccacccgaaagaaaaccctttctgtcttgtgacagatatcagccttgagcag
ggttctgacggtctactcttaatcgatatcctgaaggacaaaggttttgagttcgtatca
atcgtcatgactggttttgcgagcattgaaactgccatcgcagcgactaagaaaggtgtt
ttccactatcttacgaagccattcgaaattgagaacttgaagaagctggtaatccaggcc
cttcagacgaagctatcaactgttcttccgcgcgagatcgtgtctgaaggcgagggtgta
ttcgcagctggagatcgtaacaaagcgacttctaggcttaaaattgatcgtcctacagtg
gaagatactttcgagggcatgattggtcgctcgaaggccatgcgtgatgtattcgatcgt
attcaaaaagtagcgaaaacagattctaccatccttatcatgggtccatctgggacaggt
aaggagcttgttgcttctgctatccataaactatcaagccgtaatcttaaaaaccgcgtt
tctgtaaactgtggtgcgattcctgctgaacttcttgagagtgaactttttggtcacatg
aaaggtgccttcactggtgctatttcaaatcgcaaaggtcgcttcgagcttgctcaaaac
ggcaccatcttcctggatgaaattggtgatatgccacagcttctccaggtgaaacttctt
cgcgttcttcaagagcgtcagattgagccggttggttcttctgaaaacatcgatatcgat
gtgcgcgtgattgcggcaactcaccgtgatcttgagaaggcagttgcagaaggtaagttc
cgcgaagatctgttctatcgcttgaatgttattcctattaaaatgcctgcgcttaaagag
cgtagagaagatattcctcttcttatctcgcacttcctggatcgttttgtttcagctgac
cgttcgaacgaaatcagttttgctccattaacgatggatctattgatgggttatgactgg
ccaggaaacgttcgtgaactagagaacgtgatcgaacgtctggtcattcttcgtggtggt
aacgagattcttcctgaagatcttccagcgaaaatcttccgttcgaatccacttgctact
caccagtacaagacattgtttgaacttccagaaatcggcgtggatctgaagcagattctt
tctgatattgaagactcacttatcatgcaggcgatgaatcgcactcgcggaaataagaat
caggcatcgaagcttcttgctctgaacagaacaacactgatcgagaaaatgaaaaagaag
aacttggaattgtaa
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