Paracoccus stylophorae: JHW45_02795
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Entry
JHW45_02795 CDS
T08951
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pstl
Paracoccus stylophorae
Brite
KEGG Orthology (KO) [BR:
pstl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstl03032
]
JHW45_02795
03400 DNA repair and recombination proteins [BR:
pstl03400
]
JHW45_02795
Enzymes [BR:
pstl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JHW45_02795
DNA replication proteins [BR:
pstl03032
]
Prokaryotic type
DNA Topoisomerases
JHW45_02795
DNA repair and recombination proteins [BR:
pstl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JHW45_02795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
WCR11348
LinkDB
All DBs
Position
576581..577639
Genome browser
AA seq
352 aa
AA seq
DB search
MPKDNPIVDPEDAATGAGLVYVNDDMAGIARVRAGTGFSYRDAQGRTIRDRAERRRLNAL
AVPPAWTEVWICPDPRGHIQATGRDARGRKQYRYHPDFREVRDSAKYDHMLDFAAALPRI
RARVDRDMGLRGLPAEKVLATIVWLLENTMIRVGNSDYARENKSHGLTTLRGRHVSLKGS
EVRFRFKGKGGKEWDLDIRNRRVARIVRAVQDIPGQHLFQYLDDDGERRQVTSTEVNDYL
RRVSARDVTAKDFRTWTGTVLAALALAEYERADSQAAAKANIREAIENVAAHLGNTPAIC
RKCYVHPQIIDAYLSGDLKLELQGQIADNLKKPGLRPEERQVLRFLKRRLKT
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggataacccgatcgtcgatcccgaagacgccgcgaccggcgcgggtctggtc
tatgtcaacgacgacatggccgggattgcccgcgtccgcgccggcaccggtttcagctat
cgcgacgcgcagggccggacgatccgcgaccgggccgaacgcaggcgtctgaacgcgctg
gccgtgccgcccgcctggaccgaggtctggatctgtcccgacccgcgcggccacatccag
gcgaccggccgcgatgccagggggcgcaagcaatatcgctatcaccccgatttccgcgag
gtccgggacagtgcgaaatacgatcacatgctggatttcgccgcggccctgcccagaatc
cgcgcccgggtcgatcgggacatgggcctgcgcgggctgcccgccgaaaaggttctggcg
accatcgtgtggctgctggaaaacaccatgatccgggtcggcaacagcgattatgcgcgc
gaaaacaagtcccacgggttgacgactctgcgcggccgccatgtcagcctgaagggcagc
gaggtgcggttccgcttcaagggcaagggcggcaaggaatgggatctggatatccgcaac
cgccgggtggcaaggatcgtccgcgccgtgcaggacattcccggccagcatctgttccag
tatctggacgatgacggagaacggcggcaggtcacttcgaccgaggtgaacgattatctg
cgcagggtgtcggcgcgcgacgtgacggcaaaggatttccgcacctggaccggcacggtg
ctggccgcgctggcgctggccgaatacgaacgcgccgacagtcaggccgccgccaaggcc
aatatccgcgaggcgatcgagaatgtcgccgcgcatctgggcaacacgcccgccatctgc
cgcaaatgctatgtccatccgcagatcatcgacgcctatctgtcgggcgacctgaagctg
gaattgcaggggcagatcgcggacaatctgaaaaagccgggcctgcgccccgaggaaagg
caggttctgcggttcctgaaacggaggttgaagacatga
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