Paracoccus stylophorae: JHW45_04510
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Entry
JHW45_04510 CDS
T08951
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pstl
Paracoccus stylophorae
Brite
KEGG Orthology (KO) [BR:
pstl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstl03032
]
JHW45_04510 (topA)
03400 DNA repair and recombination proteins [BR:
pstl03400
]
JHW45_04510 (topA)
Enzymes [BR:
pstl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JHW45_04510 (topA)
DNA replication proteins [BR:
pstl03032
]
Prokaryotic type
DNA Topoisomerases
JHW45_04510 (topA)
DNA repair and recombination proteins [BR:
pstl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JHW45_04510 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WCR11646
LinkDB
All DBs
Position
complement(914151..916886)
Genome browser
AA seq
911 aa
AA seq
DB search
MPVVVVESPAKAKTIEKYLGGDYRVLASFGHVRDLPPKDGSVDPDDDFAMKWEVASDSKK
HLKAIRDALKDDPNLILATDPDREGEAISWHLLEALAPALKKGSEVNRVTFNAITKSAVS
EAMKQPRKIDQALVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVCLRLIVDRE
MEIEAFKAREYWSVHARLATPGGDEYDAQLVSLAGAKLERFDLPTAEKAAMAVSALSSRD
LRVTGVTAKPASRNPWPPFMTSTLQQEASRKLGMGAKACMSTAQRLYEAGLITYMRTDGI
DMAPEAVMAARDTIRAKFGDSYLPKSPRIYKNKAKNAQEAHECIRPTDMMQSPDRLKLGA
EDQRKLYDLIWKRTIASQMEAARMERTTVEIESPDRQVGLRATGQVMLFDGFLRVYDQGR
DDDEGEDGARLPAIREGEAATPVAHAFEAEFGKARDKDGEAPAAPTGQRAAPGLLMNDAA
SAAARQHFTQPPPRYTEATLVKRMEELGIGRPSTYASIVTTIQDREYVRKDRNRLIPEDK
GRLVTTFLVKYFPRYVSYDFTADLENELDEISAGDLIWRDVLGRFWKDFSKALEGTSELR
ISEVLDAIDEALAPHLYPPRADGGDPRECPLCGKGRLNLKTARSGGAFIGCSNYPECRYT
RPLSAPDGEEPVGDRVLGHDAGDQISLKSGRFGPYVQRGEATEDVPKPPRASVPKGWDPA
AMDLDKALQLLSLPRPVGPHPEDGVMIEAGIGRYGPYVKHDRKYANLSDVDEVFTIGMNR
AVEVLAAKQTRGRGATAAPLKELGDHPDGGAIQVMNGRYGPYVKWDKINATLPRDVSADE
ITREQALELIAAKAAKSPKKAARKPAASKTATGKTASKTAAKKPAAKKTTARKTTAAKTA
AKKPAAKKKVE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgtcgtcgagtccccggccaaggccaagaccatcgagaaatatctcggc
ggcgattaccgcgtgctggccagtttcggccatgtccgggacctgccgcccaaggatggc
agcgtcgatcccgacgacgatttcgccatgaaatgggaggtggccagcgacagcaagaaa
cacctcaaggcgatccgcgacgcgctgaaggacgatccgaacctgatcctggccaccgac
cccgaccgcgagggcgaggcgatttcctggcacctgctggaggcgctggcccccgcactg
aagaagggcagcgaggtcaaccgcgtcaccttcaacgcgatcaccaaatccgcggtcagc
gaggcgatgaagcagccgcgcaagatcgaccaggcgctggtcgatgcctatctggcacgg
cgcgcgctggattatctggtcggcttcaacctgtcgccggtgctgtggcgcaagctgccg
ggcgcgaaatccgcgggccgggtgcaatcggtctgcctgcgcctgatcgtcgatcgcgag
atggagatcgaggcgttcaaggcccgcgaatactggtccgtccacgcgcgtctggcgacg
ccgggcggggatgaatatgatgcccagcttgtctcgctggcgggggcgaagctggaacgc
ttcgatctgccgacggcggaaaaggcggcaatggcggtcagcgcgctgtccagccgcgat
ctgcgcgtcaccggcgtcaccgcgaaaccggccagccgcaatccgtggccgcccttcatg
acctcgaccctgcaacaggaggccagccgcaagctgggcatgggcgccaaggcctgcatg
tccaccgcgcagcgcctgtatgaggcgggtctgatcacctatatgcggaccgacgggatc
gacatggcgcccgaggcggtgatggccgcgcgcgacacgatccgggcgaaattcggcgac
agctatctgccgaaatccccgcgcatctacaagaacaaggcaaagaacgcgcaagaggcg
catgaatgcatccgcccgaccgacatgatgcagtcgcccgaccggctgaagctgggcgcc
gaggatcagcgcaagctgtatgacctgatctggaaacgcaccatcgccagccagatggag
gcggcgcggatggaacggaccacggtcgagatcgaaagccctgatcggcaggtgggcctg
cgcgcaaccggccaggtgatgctgttcgacggcttcctgcgcgtctatgaccagggccgc
gacgatgacgagggtgaggacggcgcccgcctgcccgccatccgcgagggcgaggccgca
acgccggtcgcccatgccttcgaggccgagttcggcaaggcgcgcgacaaggacggcgag
gcccccgcagcgcccaccggccagcgcgccgcccccggattactgatgaacgacgccgcc
agcgccgcggcccggcagcatttcacccagcccccgccccgctataccgaggcgacgctg
gtcaagcggatggaggagctggggatcggccgcccctcgacctatgccagcatcgtcacc
acgatccaggaccgcgaatatgtccgcaaggaccgcaaccgtttgatccccgaggacaag
ggacggctggtgacgacgttcctggtcaagtattttccgcgctatgtcagctatgacttc
accgccgatctggaaaacgaactggacgagatcagcgccggcgatctgatctggcgcgat
gtgctgggccggttctggaaggatttttcaaaggcgctggaaggcacgtcggaactgcgc
atctcggaggtgctggacgccatcgacgaggcgctggccccgcatctgtatccgccgcgt
gccgatggcggcgacccgcgcgaatgtccgctgtgcggcaagggccggctgaacctgaag
accgcgcgatccggcggcgcgttcatcggctgttccaactatcccgaatgtcgctatacc
cgcccgctgtcggcccccgacggagaggagccggtgggcgaccgggtgctgggccacgac
gcgggcgatcagatcagcctgaaatccggccgcttcggcccctatgtccagcgcggcgag
gcaaccgaagacgtcccgaagccgccccgcgcctcggtccccaagggctgggacccggca
gcgatggatctggacaaggcgttgcagcttttgtccctgccgcgcccggtcggcccgcac
cccgaagacggcgtgatgatcgaggcggggatcgggcgttacggcccctatgtcaaacat
gaccgcaaatacgccaacctgtccgacgtggacgaggtcttcaccatcggcatgaaccgc
gcggtcgaggttctggcggccaagcagacacgcggacgcggcgcgacggccgcgccgttg
aaagaactgggcgatcatcccgatggcggcgcgatccaggtgatgaacggccgctatggc
ccatatgtgaaatgggacaagatcaacgcgaccctgccgcgcgacgtctctgccgatgag
atcacccgcgaacaggcgctggaactgatcgcggccaaggcggcgaaatcgccgaagaag
gccgcaaggaaacccgctgccagcaagaccgcaacgggaaagacggcgtcgaagacggcc
gcgaagaagccggccgcgaagaagacgacggccaggaaaaccacggccgcaaagaccgcc
gcgaaaaaacccgcggcgaagaagaaggttgaatga
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