Pseudomonas stagnisoli: ACOAPY_02070
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Entry
ACOAPY_02070 CDS
T11799
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pstp Pseudomonas stagnisoli
Pathway
pstp00300
Lysine biosynthesis
pstp00470
D-Amino acid metabolism
pstp01100
Metabolic pathways
pstp01110
Biosynthesis of secondary metabolites
pstp01120
Microbial metabolism in diverse environments
pstp01230
Biosynthesis of amino acids
Module
pstp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pstp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACOAPY_02070 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACOAPY_02070 (dapF)
Enzymes [BR:
pstp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACOAPY_02070 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XQE67403
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All DBs
Position
complement(453791..454621)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLISQHAHIQPKHAKAWGDRHTGVGFDQLLLVEAPTNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVVDKRLTVKRQIRVETKGGIIELNLRPDGQVTVDM
GAPRLVPEQIPFQADAEALSYTVDVDGERHELAAVSMGNPHAVLRVDNVDTAPVHSLGPK
LEHHPRFPKRVNVGFLQVIDRKQARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPL
QLELPGGKLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctattgcgcttcaccaagatgcacggcctcggcaacgacttcatggtcctcgacctg
atcagccagcacgcgcatatccagcccaagcacgccaaggcctggggcgaccgccacacc
ggcgtcggcttcgaccagctgctgctggtggaggcgccgaccaacccggacgtggacttc
cgctaccgcatcttcaactccgacggttcggaagtggagcagtgcggcaacggcgcgcgc
tgcttcgcgcgcttcgtggtggacaagcgcctgaccgtgaagcggcagatccgcgtcgag
accaagggcggcatcatcgaactcaacctgcgtccggatggccaggtcaccgtggacatg
ggcgcgccgcgcctggtccccgagcagatccccttccaggccgacgccgaggcgctcagc
tatacggtggacgtggacggcgagcggcatgagctggcggccgtgtccatgggcaacccg
cacgccgtgctgcgcgtcgacaatgtcgacacggcgccggtgcacagcctggggccgaag
ctggagcaccacccgcgctttcccaagcgggtcaacgtcggcttcctgcaggtcatcgac
cgcaagcaggcgcgcctgcgcgtgtgggaacgcggcgccggcgagacccaggcctgtggc
accggcgcctgcgccgccgccgtggccgccatccgccagggctggatggactcgccgctg
cagctggagctgccaggcggcaagctgtccatcgagtgggcaggtccgggccagccggtt
atgatgaccggacccgccgttcgcgtgtacgaaggacaggttcgcctatga
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