Pseudomonas stagnisoli: ACOAPY_03520
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Entry
ACOAPY_03520 CDS
T11799
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pstp Pseudomonas stagnisoli
Pathway
pstp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pstp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACOAPY_03520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstp03021
]
ACOAPY_03520
03400 DNA repair and recombination proteins [BR:
pstp03400
]
ACOAPY_03520
Enzymes [BR:
pstp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACOAPY_03520
Transcription machinery [BR:
pstp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACOAPY_03520
DNA repair and recombination proteins [BR:
pstp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACOAPY_03520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XQE67667
LinkDB
All DBs
Position
729223..730224
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQAVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGSGVVTAADIQLDHD
VEIVNGDHVIANLADNGALNMKLTVRRGRGYEPADARQSDEDESRSIGRLQLDSSFSPVR
RVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQHQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgaccccccgtcacatcgacgttcaggcggtcagt
ccgacccgcgccaagatcaccctcgagcctctcgagcgtggttttggccataccctgggc
aacgcgctgcgtcgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgag
atcgacggcgtactccacgagtactccgctatcgaaggcgtgcaggaagatgtgattgag
atcctgctcaacctgaaaggtctggccatcaagctgcacggtcgtgacgaagtcaccctg
actctggccaaaaagggctcgggtgtggtcactgctgccgatatccagctggatcacgac
gtcgagatcgtcaacggcgatcacgtaatcgccaacctggcggacaacggcgctctgaac
atgaaactcaccgtgcgtcgtggccgtggctacgagccggctgatgcccgtcagagcgat
gaagacgaaagccgtagcatcggccgtctgcagctggactcctcgttcagcccggtccgt
cgtgtggcatacgtggtggagaacgcccgcgtcgagcagcgtaccaacctggacaagctg
gtcatcgacctggaaaccaacggcaccctggatcctgaagaggccatccgtcgtgccgcg
accatcctccagcaccagctggcggccttcgttgatctgaagggcgacagtgagccggta
gtggtcgagcaggaagacgagatcgatccgatcctcctgcgtccggttgacgacctcgag
ctgaccgtacgttcggccaactgcctcaaggcggagaacatctactacatcggtgatctg
attcagcgcaccgaagtagagctgctcaagactccgaacctgggcaagaagtccctgacc
gagatcaaggacgtcctggcctcccgtggtctgtccctcggcatgcgcctcgacaactgg
ccgccggcaagtctgaagaaggacgataaggctactgcctga
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