Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_000601
Help
Entry
Pst134EA_000601 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Pst134EA_000601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pstr03041
]
Pst134EA_000601
03009 Ribosome biogenesis [BR:
pstr03009
]
Pst134EA_000601
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pst134EA_000601
Spliceosome [BR:
pstr03041
]
Complex A
U1 snRNP components
U1 related factors
Pst134EA_000601
Complex B
Pst134EA_000601
Ribosome biogenesis [BR:
pstr03009
]
Eukaryotic type
Pre-60S particles
Helicases
Pst134EA_000601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2443
UTP25
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
72021284
NCBI-ProteinID:
XP_047812976
LinkDB
All DBs
Position
1:complement(2782919..2786425)
Genome browser
AA seq
551 aa
AA seq
DB search
MSYGNSYGGGNSGGGYGGSSSGGYGGGGGGYGGGGGGYGGGGGGYGGGGGGGDRMSGLGS
GLNRPKWDSSTLTKFEKNFYNEDPRISSRSERDINQFRSEKEIQVFGKNIPKPISNFSEA
GFPDYIMTEIRNAGFNAPSPIQCQAWPMALSGRDVVAVSATGSGKTIAFSIPAMIHINAQ
PLLAPGDGPIVLILAPTRELAVQIQGECTKFGASSRIRNTCVYGGVPKGQQIRDLTRGAE
IVIATPGRLIDMLESRKTNLHRVTYLVMDEADRMLDMGFEPQIKKIVEQIRPDRQTLMFS
ATWPKEVQRLASEYLKDFIQVNVGSLDLTANINITQIVEVCSDFEKRGKLIKHLEKISAE
SAKVLIFVGTKRVADDLTKYLRQDGWPSLAIHGDKQQQERDWVLEEFKSGRSPIMIATDV
ASRGLDVKDIAYVINYDMPNGIEDYIHRIGRTGRAGRTGTAYSYISADQSKLARELVKIL
RDAKQVVPSALVEMASLGGGGGGGRRGGGGGYGGGRGGGGGGRYGGGGASGANSYGMGRG
GGGGGGGGSRW
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacggcaacagctacgggggaggtaactcaggtggtggttatggcggaagtagc
tctggcggctacggtggtggaggcggcggctatggaggtggtggtggtggctacggtgga
ggaggcggtggttatggtggaggcggtggtggaggcgaccgcatgtctggccttggtagt
ggattgaaccgtcctaaatgggacagctcgaccttgaccaagttcgaaaaaaacttctac
aatgaagatcctcgtatctcctctcgttcagagcgtgatatcaaccaatttcgctcagag
aaggagattcaagtgttcgggaagaacattcccaagcccatctcgaacttcagcgaggct
ggctttcccgactatatcatgactgagatccgcaacgctggattcaacgctcctagtccc
attcaatgccaagcttggcctatggctctcagtgggcgtgatgtggtggccgtcagtgcc
actggatcgggcaaaaccatcgctttctccattcctgctatgattcacatcaacgctcaa
cccctcctagctccaggagacggaccgatcgttttgatcctcgccccaactcgtgagttg
gccgtgcaaattcaaggtgaatgtaccaaattcggcgcctcgtcccgcattcgaaacaca
tgcgtctacggaggtgtccccaagggtcaacaaatccgtgacctcactcgtggtgccgag
attgtcatcgcgactcctggtcgtttgatcgatatgctcgaaagtcgcaagacaaatctc
catcgagtcacttatctcgtgatggacgaagcagaccgaatgctcgacatgggtttcgag
ccccaaatcaaaaaaatcgttgaacaaattcgacccgatcgacaaaccctcatgttttcc
gccacttggcctaaggaagtccaacgtctggctagcgaatatctcaaggacttcattcaa
gtcaacgttggaagtctagatctcaccgccaacatcaacatcacccaaatcgttgaggtt
tgcagtgacttcgagaagaggggtaaactgatcaagcatctcgagaaaatctcagccgaa
tccgccaaggtactcattttcgtcggaacgaagcgagttgctgacgatctgacaaaatat
ttacgtcaagatggctggccttcgcttgcgattcatggtgacaagcaacagcaagaacgt
gattgggtactggaagaattcaagagcggccgtagcccgatcatgattgccaccgatgtc
gcgtcgcgtggtctagacgtcaaagatatcgcttatgttattaattatgacatgcctaac
ggtatcgaagactacattcaccgtatcggtcgaacagggcgtgctggccgtacgggtaca
gcctacagttacatcagtgctgatcagagcaagttggccagggaattagtcaagattctc
agagatgcgaagcaagtagtcccgtcagcattagtagaaatggcctcactcggaggtggt
ggtggcggtggacgtcggggtggcggcggtggatacggcggtggacgaggtggaggtgga
ggtggcagatatggcggcggcggagcctcgggtgccaattcttatggtatgggacgcggt
ggtggtggtggcggaggtggcggttcgcggtggtaa
DBGET
integrated database retrieval system
