Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_000854
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Entry
Pst134EA_000854 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03082
ATP-dependent chromatin remodeling
pstr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Pst134EA_000854
03083 Polycomb repressive complex
Pst134EA_000854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pstr03036
]
Pst134EA_000854
Chromosome and associated proteins [BR:
pstr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
Pst134EA_000854
Histone modification proteins
HAT complexes
HATB complex
Pst134EA_000854
HDAC complexes
Sin3A-HDAC complex
Pst134EA_000854
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
Pst134EA_000854
PRC2.2
Pst134EA_000854
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
Pst134EA_000854
Heterochromatin formation proteins
Other heterochromatin formation proteins
Pst134EA_000854
Chromatin remodeling factors
NuRD complex
Pst134EA_000854
NuRF complex
Pst134EA_000854
NuRF complex (fruit fly)
Pst134EA_000854
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
DSE1_N
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
EIF3I
WD_LRWD1
DNAI3_WD
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_NUP159_NUP214
eIF2A
ANAPC4_WD40
Beta-prop_HPS5
PAC11
Beta-prop_WDR41
Beta-prop_SCAP
DUF4394
Motif
Other DBs
NCBI-GeneID:
72021536
NCBI-ProteinID:
XP_047813242
LinkDB
All DBs
Position
1:3990246..3992622
Genome browser
AA seq
428 aa
AA seq
DB search
MARDGNVEEQETQELTKVANEEYKIWKKNSPFLYDLVLTHALDWPTLTTQWFPDQELSPD
KSYTTQRILIGTHTSDNEPNYLQIVNVRLPNPNCEELGLDKYDEQSGEIGSYSDTQPRFK
VIQSIPHVGEVNRARYMPQNPDLIATKTVTGDVYVFDRTKHPSDPPKDNVCKPDITLRGH
SKEGFGLDWNPSKSGEVLSASEDETICHWDINSYTKGNPVIEPYRVYKGHSAIVSDVSWH
SSHGNLFASVSDDKQLLIWDTRNPDTTKASQVVTEAHNGEINTVAFSPQSDFLLVTGGAD
QNINLWDNRNLSNKLHCLQHHQDELISLAWSPFHPTVFCSGSSDRRINVWDLSKIGEEQT
PDDAEDGPPELLFIHGGHTTRPTDVSWSPTTPWHLVSAAEDNVIQLWSPNSTITKGPNGI
SIPLDELE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggatggcaatgttgaagaacaggaaactcaggagctgactaaagtagcaaat
gaggagtacaagatttggaagaaaaactctccatttctttacgatttggtattgacacac
gccttggattggcctactctgacaacccaatggttcccagaccaagagttatcgcccgac
aagtcatatactacccaaagaatcctgattggtacccacacttcggacaatgaacccaac
tatcttcaaatcgtaaatgtcaggttacccaatccaaattgtgaagaattgggtctagat
aagtatgatgaacaatcaggagaaattggatcttacagcgacactcaaccccgtttcaaa
gtcattcaatcgatcccacacgttggtgaagtcaatcgggcgcggtacatgccacaaaat
cctgacttgatcgcgacaaaaacagtcacaggcgatgtctacgtctttgatcgtactaag
cacccatcagatcctcccaaagacaatgtttgcaagcctgacattaccttgagaggacat
tctaaggaaggctttggattggattggaacccgagcaaatctggtgaagttttgagtgcc
tcggaggacgaaacaatatgccattgggacataaactcttacaccaagggaaatccggtc
attgagccgtatcgggtatacaaggggcacagtgctatagtttcagatgtttcatggcat
tcatcacatgggaacttgttcgcctcagtcagtgatgacaagcaattgctcatatgggat
actcggaaccccgacacgacgaaggcgtctcaagtggtcactgaggcacacaacggtgaa
attaacaccgtcgcgttctcgccacaatcagactttctgctggtgactggtggcgcagac
cagaacatcaatctttgggacaatcggaatttatcgaacaagctccattgtctgcaacat
catcaagacgagcttatctccctggcgtggtcaccgttccatccgactgtgttctgttca
ggttcgtctgatcgtaggatcaatgtgtgggatctgagtaagattggtgaagagcagacc
cccgacgacgcggaggatggaccgccggaacttctatttatccatggtggtcataccact
aggccaacagatgttagctggagcccgactacaccctggcaccttgtcagtgcagcagaa
gataatgtgatacagctctggtcgcctaattcaactataacaaaaggtccaaatggtatc
agcatacctctggacgaactggaatag
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