Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_001004
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Entry
Pst134EA_001004 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pstr03009
]
Pst134EA_001004
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pst134EA_001004
Ribosome biogenesis [BR:
pstr03009
]
Eukaryotic type
Pre-60S particles
Helicases
Pst134EA_001004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Nucleo_P87
Dicty_REP
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
72021685
NCBI-ProteinID:
XP_047813402
LinkDB
All DBs
Position
1:4726527..4731346
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AA seq
747 aa
AA seq
DB search
MAVVSSQAKSFDDLNPPLASWVLDTIKSLGFHQMTPVQAHTIPLFLENKDVVVQAVTGSG
KTLAFVIPIIERLIQLEPRPHSHVAAIIISPTRELATQTFQVVNQFLENRPSTSDQENPS
SSSVAPFLKAMLLIGGTGGRSIKQDVSEFQENGANILVATPGRLEEFLFGYSSLTKRKTN
DFCESKLRTPFKTLVNLKNLEVLVLDEADRLLDLGFAPVLSNILGKLPKQRRTGLFSATL
LNDGLTELIRAGLRNPVKVVVKVQTASQNLLGNDAGPTALTNQFIAVPHVAWKMPQLVRL
LNHLAHPDPDQKTQGARKLIVYFATCACVEYFYKILAVLDELKSFSVHSLHGQQSPTRRT
MTFTAFKNSNPSIPAVLLCTDLVARGLDLPDVDVVIQFDPPKDVRNFFHRIGRTARAGKS
GRAIVLLQSSRELDYVDYLKLKSLHLQPLPYIRSPDESRRAERSQTDTDSAADKFNQKVK
KIVKTDRGLHDRGVKAFVSYVQFYSKHETSYIFKLDQLDLLSLAFHGFGLIKLPKMPELK
PFRNQLDLVTSDGFEVGQEDFNWPKYSYLDPLKEAQREEKYKQSLEAQKSIKETNSKTKP
SKQTNQTPTPTTTTITPIDKKILELEQKKLPDKAAWSKKINAKISKEQKRLKRVREKEGG
RFKRNNKGADDDDQDNDNDNEEEEEEDGDDNGETDWKELVMEKKTLKKIKLESDQQKLIE
NDPNQVATANPPPGFDKNLGEFFQGLA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgtgtcgagccaagctaagagcttcgatgacctcaacccaccactagcatca
tgggtcttggataccatcaaatcacttggttttcatcagatgaccccagttcaagcccat
actatccctctattcttggaaaataaagatgtggttgtccaagcagtcactggatcagga
aagacattggcatttgtaattcctattatcgagcgacttatccagttggaacctcggccc
cattcccatgttgctgcaattatcatcagtcccacaagggaactggcaacccaaacattt
caagttgtcaatcaatttctagagaatagaccttccacctccgatcaagaaaatccatca
tcaagctcagtagcgccttttctgaaagcaatgctactgataggaggaactggaggtcgt
tcgattaaacaagatgtatccgagtttcaagaaaatggcgctaatattctagtggctaca
cccggaagattggaagaatttttgttcggttatagtagtcttactaaacgtaaaacaaat
gatttctgtgaatctaaactcagaacacccttcaaaactctcgtcaacctcaaaaacctg
gaagttttagtacttgacgaagctgatcgcttgctcgacttgggtttcgcacctgtactc
tccaatatcttgggcaaattaccgaaacaacggagaacgggattattctcagcgacatta
ctgaacgacggtttaactgaactaattagagccggattacgaaacccagtcaaggtggta
gtaaaagtccaaacagcttctcaaaacctcctcgggaatgatgctggtcccacagctcta
acaaatcagtttatcgccgtccctcacgtggcttggaagatgccccagttggttcgctta
ctcaatcacctcgctcatccggaccctgaccagaagactcaaggggctagaaaattaatc
gtttactttgctacttgtgcttgtgtagaatatttctacaagattcttgcagtacttgat
gaattgaaatcattttcggttcattcacttcatggtcaacaaagtccaactcgtcgaacg
atgacctttacggccttcaagaactcaaatccatcaatccctgccgtgttactctgtacc
gatctggtggctcgaggactagatctacctgatgtagatgtcgttattcagttcgaccct
ccaaaggatgtgcggaatttcttccatcggattggtcgtactgcaagggcaggcaaaagt
ggacgtgcaatcgttctacttcaatctagtcgagaactggactatgttgattatctaaag
ctcaaaagcttgcacctacaacccctgccatacatccgatcacctgacgaatcgagaagg
gcagaacgatctcaaacggacacggattcagctgccgataaattcaatcagaaagtcaaa
aagatcgttaaaacagatcgagggctacacgatcgtggcgtcaaagcgtttgtatcctac
gttcaattctattcgaaacacgaaacctcgtatatttttaaactggaccaacttgactta
ttgtcactcgcttttcacggctttgggttgatcaaattaccgaagatgcccgaattaaag
ccattccgaaatcaacttgacctggttacttcggatggattcgaagtgggacaggaggat
ttcaactggcctaaatattcttacctagatccattgaaagaggcacagcgagaagagaaa
tataagcagagcttagaggcccaaaaatcaataaaagaaaccaacagcaaaacgaaaccc
agtaaacagaccaatcagactccgactccgacgacaactactataacaccaattgataaa
aagatcttagaattggaacagaaaaagttacccgataaggccgcttggtctaagaaaatc
aacgctaagatctccaaagagcagaaacgattgaaacgagtaagggagaaggaaggtggg
aggtttaaacgaaataacaaaggcgctgatgatgatgatcaggataacgataacgataac
gaagaagaggaggaagaagacggtgatgataatggagaaacagattggaaggaactagtg
atggagaaaaaaactctcaagaaaattaaactggagagtgatcaacagaaattgattgaa
aatgatccaaatcaagtggctactgctaatcctcctcctggttttgataaaaatcttgga
gagttcttccaaggattggcttga
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