Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_001094
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Entry
Pst134EA_001094 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pst134EA_001094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_001094
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
Pst134EA_001094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Rrp44_S1
PIN_4
Rrp44_CSD1
OB_Dis3
CSD2
OB_HELZ2
OB_RNB
zf-CCCH_12
Motif
Other DBs
NCBI-GeneID:
72021775
NCBI-ProteinID:
XP_047813497
LinkDB
All DBs
Position
1:<5184548..>5188292
Genome browser
AA seq
1082 aa
AA seq
DB search
MAIQSHPPITILNLTNHSKEHYGAEAVTQKQYLRKTNRGKVQKLCREHYLRNDIPCGSSS
CSDCQRILSSIQLDHGQGYSQDDDRMEIEESSEMTESKKKRRKVLLLSEKGRTGHRKYTN
KHYLVLDTNVVLRQIDLLEASTFGTDLIIPQTVLDEVRHRSLPIFNRLKSLINETDSTGR
SIRGWVFWNESRFDTHIKREPDESINDRNDRAIREVCKWYKAHLSSQKIDIVLLTDDRAN
FEKANQQHIHASTTKDYVENMASESSQLLLDLVANTGSAFESDDPNNAQKEKIKSDFYQE
YLPLGQLQSGIQSGNLFQGTFRPNPYNYLEGSIFHNEFEKPILLIGRESMNRSIDGDLVV
VALLPREEWKSSTDDVVVEQDAVGAAEDPDPESAGSSLEEETEKKEEELTISKTIKKTGN
TATSQPTGKVVGVIKRNWRPYVCHIDRASIPISALQSSLSAHAVFAMPLSRSVPKIRIRT
RQASTLANQKILVSIDRWEPNSRYPEGHFVRALGIVESKDTEQESLLLEHDIPYRPFGKA
ILDCLPTAGDKWIVPEKSSSSQLWKDREDFRDLMICSIDPPGCQDIDDALHAKRLTNGNI
EVGVHIADVAHFVLPDTPMDVEAASRGTTVYLVDKRIDMLPSLLGTNLCSLKPEVERFAF
SVIWELRESDSKIERVRFTKSVIKSKAAFTYEAAQIRKDDSNLKDEITESIRLLNKLAIQ
LKKARMDAGALNLASPEIKIHMSSSESSDPVDVEQKESRETNSLVEEFMLLANISVARRI
YESFPQTAVLRRHNPPPKTNFEVLQDVLLKRRGLELDVSSSASLASSLDKCIDPEVPSFN
TLVRIMATRCMLPAEYFGSGSFSKDTYGHYGLASEIYTHFTSPIRRYADVLVHRQLQAAI
SDSPLPSSMNSKSFIEKIMSNINKRHNSAQKAGRASVEFYVAIAIKAKQQQQSASIPGLV
SSAESGSPTLNAFVSAEAFVIRTFRNGLAVFVSEYGLEGLIKFKEDQEYDGERYEIGISP
KPSSSSSSTPNKSKSADLGDHGRVKIGIFDKVLVGISTEQDRSTQRGRVKMVLLSPINSS
DL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggccatccagtctcatccaccgatcaccatcctgaatctgacgaaccattccaaggaa
cactatggagcagaagcagttacacagaagcaatatctgaggaagaccaaccgggggaaa
gtacagaaactgtgcagggaacactaccttcgaaacgatataccctgcgggtcgagcagc
tgttcggactgccaacggatactctcatccattcaactggaccatggacaaggctactct
caagatgatgaccggatggagatcgaggagtcgagcgagatgactgagagcaagaagaaa
cgaagaaaggtactactactcagcgagaagggaaggactggccatcgcaagtacaccaac
aaacattacctcgtcctcgataccaacgttgtcctacgccagatcgacttactcgaagca
tccacctttggcaccgacctcatcatccctcagactgtcctcgatgaagtccgacatcgt
tctttgccgatcttcaatcgactcaagagcttgattaacgagaccgattcgacggggagg
tctatcaggggatgggtattttggaacgagagtagattcgatactcatatcaaacgcgaa
ccggacgagtcgattaacgaccgcaacgatcgagctatcagggaggtctgcaagtggtac
aaagcccacctttcatcgcaaaaaatcgatatcgtcctactcactgacgacagggccaat
ttcgagaaagctaatcagcagcatatccatgcctcaaccaccaaagattatgtagaaaat
atggcatcagagtcatctcaactcctcctcgatcttgttgctaatactggctcagcattc
gaatcagacgaccccaataatgcccagaaggagaaaatcaaatccgacttctatcaggaa
tatctgccactgggccaattacagagtgggatccaatccggtaatctctttcagggtacc
tttcgacccaacccatacaactacctcgagggatcaatctttcataatgaattcgagaaa
ccgatactcttgatcggacgagaatcgatgaacagatctatcgatggtgatcttgtggta
gtcgcactcctaccaagagaggaatggaaatcatccactgacgatgtggtagtcgaacag
gacgcggtgggtgcagctgaggatcctgacccagaatcagcaggctcatcactagaagaa
gaaactgaaaaaaaggaagaagaactcacgatctccaaaacgattaagaagacgggtaat
actgcgaccagtcaacccaccggaaaagtggttggagttatcaaacggaattggagacca
tacgtctgtcatatcgatcgagcctcgatcccgatctctgccctacaatcgagtctatcg
gcccatgcagtctttgccatgcctctgtctcgatcggtacccaagatcaggattcggact
cgccaggcttccaccctagccaatcagaagatcctggtctctatcgatcgttgggagccc
aactcccgatacccagaaggtcacttcgtcagagccctcgggatagtcgaatctaaggac
accgaacaggagagtctcttactcgaacacgatattccttatcgaccattcggtaaagct
attctggattgtctacctaccgctggtgataaatggatcgtacccgagaaaagctcatct
agtcagctgtggaaagatcgtgaggattttagggatctcatgatttgtagtatcgatcct
cctggatgccaggatattgatgatgctctacacgcaaagagattgacaaatggtaatatc
gaggtcggcgtccatattgccgatgtagcccatttcgttctacctgatacgccgatggat
gttgaagcagcatcaagagggacgacggtttatttagtggacaaacgaattgacatgctt
ccatcactcttaggaaccaatctatgttcattgaagccggaggtagaaagattcgcattt
tcagtgatctgggagttacgtgaatcggatagcaagatcgagcgagttcggttcacgaaa
tcggtcatcaaatctaaagcggctttcacctatgaggcagcacagatcagaaaagatgat
agtaacttgaaagatgagattactgagtcaatccgattgttgaataagttggctattcaa
cttaagaaggctaggatggatgctggcgcactcaatctcgcctcccctgaaattaaaatc
catatgagctcctctgaatcaagtgatccagtcgatgttgaacaaaaagaatctagggaa
actaatagcttggttgaagagttcatgctactcgctaatatcagcgttgcaagaaggatt
tatgaatcattcccccagaccgccgtattgagacgtcataatcctcccccaaaaactaac
ttcgaagtcttgcaagacgtgctcctcaagcgacgtggcttggaactagatgtatccagc
tcagccagtttggctagttcattagataaatgtatcgatccagaggttccttctttcaat
actttggttaggatcatggctacccgttgtatgttgccggccgagtatttcggatcgggc
tcgttctctaaagatacttatggacattacggtctagctagtgagatttatacacacttc
acaagtccaattcgaagatatgcagacgtattagttcatcgacagcttcaagcagcaata
agtgattctccattaccgagctcgatgaactccaaatcgttcatagaaaagataatgagt
aacatcaacaaacggcataattcggctcaaaaagctggtcgtgctagtgttgaattttac
gttgctattgccatcaaagctaaacaacaacaacaatctgcttctattcctggtttggtt
tcttcggctgagagtggttctcccactctgaatgcttttgtctccgctgaggctttcgtc
attcgtacgtttagaaacggtctggcggtcttcgtttctgaatacggattagaaggatta
attaaattcaaagaagatcaagaatatgatggagaaagatatgagatcgggatcagtcct
aaaccatcatcatcatcatcatcgactccgaacaaaagtaagagtgctgatcttggtgat
catggaagggttaagatcggaattttcgataaagttttggttgggatttctactgagcaa
gatcgctctactcaacgtggtagagtgaaaatggtcttattgagtcctattaattcttct
gacttatag
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integrated database retrieval system
