Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_003012
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Entry
Pst134EA_003012 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03022
Basal transcription factors
pstr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pst134EA_003012
09124 Replication and repair
03420 Nucleotide excision repair
Pst134EA_003012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_003012
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_003012
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Pst134EA_003012
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Pst134EA_003012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
PRORP
Pinin_SDK_memA
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
72022476
NCBI-ProteinID:
XP_047811848
LinkDB
All DBs
Position
2:complement(3099040..3101853)
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AA seq
402 aa
AA seq
DB search
MSNRKPAGAQSSKLGKKLPSRNTTQNQGEILGTSNNNNNSFSNSIHNKAVTGPSNLQRDQ
AGRIVEFFCQSDVCPVCKSDRYLNPDLRLLVSKCYHKMCESCIERIFSLGPEPCPICGQI
LRKASFAPQTFENLAVEKEVVIRKRISKYFNKRPEDFATLDAYNNYLEEVEDITFNLING
VDVAETEAKIKQFQNENQELIAQNAVHEARQVELNKRQEEATRKEREERKAELLRLEEEA
RREEEEIKRATIHSLETSNVNGEELVARQRAVAQKRATARALASDLATKTSTKKGSMGLD
RNSNEFENQINRPDIEGEINQWDDYSSMFDLRKLDQNLHPGYIDHDSMRFILADHALALV
GGFEIESVWERQLRSALMGLFVPPPQPDSINQTTSDDLSLIS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccggaaaccagcaggagctcaatcctcaaaactaggcaagaaattaccatca
cgaaacaccactcagaaccagggagaaatactaggaacttcaaataacaataacaactcg
ttctcaaactcaattcataataaggccgtcaccggtcctagtaatttacaacgcgatcaa
gctggacgaattgtcgaattcttttgtcaatcagatgtttgtccagtttgtaaatctgat
agatatttgaatccagatctacgtttattagtttcgaaatgttaccacaagatgtgcgaa
tcgtgtatagaaaggatattttcattaggacctgaaccgtgtccaatctgtggacagatc
ttgaggaaagctagttttgcaccacaaacatttgagaacttggcagtcgaaaaagaagtg
gtcattcggaaacgtatttctaaatacttcaataaacggcccgaggatttcgccactttg
gatgcttataataattatcttgaagaggtagaagatatcacatttaatttaatcaatgga
gtagatgtagccgaaacagaagcaaagatcaagcaatttcagaatgagaatcaagaactg
atagcccagaatgcagtgcatgaagcgcgacaggtagagctgaataaacgacaggaagaa
gctacccgaaaggagcgtgaggaacgtaaggctgagttattgaggttagaagaggaagct
agaagggaagaagaagaaatcaaacgggctacaattcatagtttggaaacatcgaacgtg
aatggagaggagttggtagctcggcaacgagccgtagcccaaaagcgagccacagcgcga
gcattagcgagtgatctagcaacgaagacgagtacgaagaagggctctatgggactggat
agaaactcaaatgaattcgaaaatcaaatcaacaggccagatatagagggagaaatcaac
caatgggacgactattcatcgatgtttgatcttaggaagttagatcagaatttacatcct
ggatatattgatcatgattcgatgcgctttatcttggctgatcatgctctcgctcttgtt
ggcggtttcgaaatcgaatccgtctgggaacgtcagctccgctctgctcttatgggactc
tttgtccctcctcctcaacctgattctattaatcaaactacctcggacgatctttctctt
atctcttga
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