Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_003057
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Entry
Pst134EA_003057 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K14299
nucleoporin SEH1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Pst134EA_003057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_003057
04131 Membrane trafficking [BR:
pstr04131
]
Pst134EA_003057
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Pst134EA_003057
Membrane trafficking [BR:
pstr04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
Pst134EA_003057
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
72022521
NCBI-ProteinID:
XP_047811897
LinkDB
All DBs
Position
2:3318501..3320765
Genome browser
AA seq
584 aa
AA seq
DB search
MAQTHFLGLPNKDLISSFSFNYYGTRLAVSSLDHHIYILSSDLETGKWPEDQSHLEQQTQ
AKTPSIQAWTAHEGPVIKVIWSDPIHGEILASAGTDGTVRIWEEDTRRLDQSNGNENQKP
SKTTSKQNSALSPGGWYQQTIIADSNRTIRDIGFSPSETSLRLASISTDHHLRVYECLET
NSFSSDNWNLIINIDLSVLSNQPTNLSDHLNNPHLVTIPGSNNTGIGGANSNNNTGFQQH
SSFTSVRGFDPTVNLNNPKNNINNSSNNFNLINPLSGIRSSSTPTHPSPFNQNTINNVSA
SPFSEQHLESFGAWSLSWCPESYWGDILAASSGSSGLIRLFKFSAHSQWENFGVLNPTSH
LKSSSSTTLQDPNNTLNSPRQNHPSGPTSSLNASGPGTSSSTLTSSSSVSPISSLAWAPP
CGRDYHLIAAGHRDGRARIWKLIPPSSSSASNQWSFILDTELEDHVHHPDTSIIDHNSTP
QLNKNISNNVNSSSNGIGQPVAAGGGVGKCEWNVTGTVLSTSGSDGKVRIWKMGYTSRWV
NTAEINCIDHDSQAQSQSHLDHHHHHQSSTHHNHLSSTGIVNLG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcccagactcacttccttggacttcccaacaaagatctgatcagctcattctcattc
aactactacggtactcgactagcagtctcatcactcgatcaccatatctacatcctatcg
tccgacttggagactgggaaatggccagaagatcaatcgcatctcgaacagcagacacag
gctaagacaccatccatccaggcttggactgcccacgaaggaccggtgatcaaagttatc
tggtcagatcctatccatggcgaaattctcgcgtcggctggcactgatggaacagtcaga
atatgggaagaagataccagaaggctcgatcaatctaacggaaacgagaaccagaaacct
agcaagaccacaagcaagcaaaactcagctctatcgcctggaggatggtaccaacagacg
atcatagcagattcgaaccgaacgatccgagatatcggattcagtccatctgagaccagt
ctaagactagcatcgatctcgaccgaccaccatttaagagtttacgaatgtttagagact
aactcattctctagcgataactggaatttgatcatcaatatcgacctctcagtgctctct
aatcaacccacgaacttatccgatcatctcaataatccacatctggtcacgatccctgga
tccaataatactggaatcggtggagctaatagtaacaacaatactggttttcaacaacac
tcttcattcacttcagttcgtggtttcgatcctacggtcaatttaaataaccctaaaaat
aacatcaataatagttctaataacttcaacttgatcaaccccttatcagggataagatcc
tcaagcacacctactcatccatctccgttcaaccaaaatacgatcaacaacgtgtctgct
tcaccattctctgaacaacatctcgaatcctttggggcctggtcactaagttggtgtccc
gagagttactggggcgatatcctcgctgcctcctctggatcgtccggtctgattagactg
ttcaaattctcagctcattcccagtgggaaaacttcggagttttgaatcctacgagtcat
ctcaaatcatcatcttctacaactcttcaagatccgaataataccctcaattcaccaaga
cagaaccatccatccggaccaacatcctctctaaatgcatcgggacctggcacttcatcg
tcaactcttacaagttctagctcggtttcacctatctctagtttggcttgggctccacct
tgtggacgagattatcatctcatagccgctggtcatagagacggtagagcaagaatatgg
aaacttattcccccctcttcttcttctgcttcgaatcaatggagttttatcttggatact
gaattagaagatcatgtacatcatcccgatacttcaattattgaccataattcaacccct
caattaaataaaaacatctccaataatgttaatagtagcagtaacgggatcggtcagccc
gttgctgcaggtggcggagtaggtaaatgcgaatggaacgttactgggacggttttaagt
acctctggatctgatggaaaagtacggatttggaagatgggatatacttctagatgggtc
aatactgctgaaatcaattgtatcgatcacgattctcaggctcagtctcagtctcatctc
gatcaccatcatcatcatcaaagttcaacccatcataatcatttgagtagtactggaatc
gtcaatctcggttag
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