Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_003405
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Entry
Pst134EA_003405 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pstr03009
]
Pst134EA_003405
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pst134EA_003405
Ribosome biogenesis [BR:
pstr03009
]
Eukaryotic type
Pre-60S particles
Helicases
Pst134EA_003405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
BppL_N
Motif
Other DBs
NCBI-GeneID:
72022868
NCBI-ProteinID:
XP_047812257
LinkDB
All DBs
Position
2:complement(5036497..5039886)
Genome browser
AA seq
1037 aa
AA seq
DB search
MGKSQDEESWDGISDDEDEQQSIDLTETLANIKPSKTSRIELGEERSDGEQDEDEDEDDF
IRLSSKKANFKAGSKVLKSSASNKKISGAITGGGSFQSLGLHPSLLRAILLRGFNTPTPI
QRAVLPHILASPPRDVVGMARTGSGKTLAYLIPLIQSLGGIHSIQFGIRALILVPTRELA
LQVLKVGKDLAKGFIQGDRSKSNSDDPDQARKVEGLRWGLIVGGDSLEDQFTMFSTNPDV
IIATPGRLLHLVVEMNLDLKSVSFVVFDEADRLFEMGFATQLEETLHRLPANRQTLLFSA
TLPKTLVEFAKAGLQNPKLIRLDSESKISSDLQMAFLSVKPIEKEAALLVLISNVVGVPK
ADMTDTPNDDFNFQSKPNFSRGTGANSSTVRTKPKPTQELAAHQTIVFVATKHHVEYLGG
LLTAAGYRVSLIYGALDQIARREQLQAFRLGQTNIMVVTDLAARGIDIPILENVINFDFP
SSARAFVHRVGRTARAGRKGWAYSLVTQSELPFLMDLQLFLSRPLLTCPLPVNADSSQTD
FTSSLVIGTIPRELLDAETEYVRETLVSPNSALIALGTVVKRAQKMYEKSQSTASNESYR
RSKEFVLNGKGFSGTKNEEASIHLIFQNRKQESGGKQVRRSVKRTKKDEETVHLRDQLLA
KVNQFTPNETVFEIGTRGKGVAAQLMRDRRKSMGKKIVRTKEAAQLREEKYQAEQSIDAP
EPSAKASLPTKKVALVAATEGELEETFEMPRKKTKVKEGFRDPEAYLTYEQSGAAAEKGY
NLNEGTSAEFVSQSKLALFDLGTNDEGKLSSLSSTQKASQVKWDRKTKKFVKVNQLGQDN
IKLVKTESGMKLPATFKTGTFDNWKKTSKIKIPNVGEHELLNTNVFNHLHRKFRHQSGAE
NGPRNNQDHHQHRNGGGGGDHHHQSRGKNGNGVAGHGKGGKKVFTKTIDGQKKFLGPSHV
VTRGSSTSNKSHFSSNNNTNKHSSKSNFSGHNRNQLKHNSKDRNAGAGLKSVDQIRKSRD
LKERRKIRSNQPSRRKK
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagagtcaggacgaagaatcgtgggatggaatatcggatgatgaagatgaacaa
cagtcgatcgatctaaccgaaacactagcaaatatcaaaccatccaagactagcagaatc
gaactaggagaagaaaggtcggatggggagcaggatgaagatgaggatgaggacgatttt
atcagattatcatcgaagaaggctaacttcaaagctggatcaaaagtattgaagtcatct
gctagcaataagaagatctcaggggcgatcaccggtgggggctcattccaatcactcgga
ctacatccatcgctactacgagctatcctcttacgtggtttcaatacaccaacacctatc
caacgcgccgtgctgcctcacatcctcgccagtccaccacgtgatgtagtcggaatggct
cgaactgggtcggggaaaaccttggcctatctgatcccactcattcaatctttgggcgga
atccattcaattcagttcgggatcagagctctcatcctcgtacccacccgtgaactagcc
ctgcaagtcttgaaagtcggcaaagatcttgctaaaggttttatccaaggcgatcgatct
aaatcaaactcagatgaccccgaccaagctcgcaaggtggaaggtctcaggtggggcctg
atcgtcggtggggactcactcgaggatcagtttaccatgttttccactaatcccgacgtt
atcattgccaccccaggtcgtttacttcatttggtggtcgagatgaatctagacctcaag
tcagtatcctttgtcgtcttcgatgaagccgacagattattcgagatgggttttgcgact
caactagaagagacactgcatcgactaccagccaacagacagaccttgttattctctgcc
actctacctaaaactttggtcgaattcgccaaggcaggactacagaacccaaaattaatt
cgactagatagtgaatccaagatcagttctgaccttcagatggctttcttgagcgtcaag
ccgatcgaaaaggaggctgcattactcgttttgatcagtaatgttgttggcgtacctaag
gccgatatgacagacacaccaaacgatgatttcaacttccaatccaaaccaaatttctcg
agagggaccggagccaactcatcgacggtccgaacgaaaccaaaaccaactcaggagctt
gcagcccatcaaacgatcgtctttgtggccactaaacaccatgtcgaatacctgggtggt
ctactcactgctgctggttatcgggtctcgttaatctatggtgcactcgatcaaatcgct
cgtcgtgaacaactccaagcatttcgactaggtcagaccaatatcatggtcgtcaccgat
ctagccgcaagaggtatcgatattccgatcctagagaacgtgatcaacttcgatttcccc
agttcagctcgtgcgtttgttcatcgagttgggcggactgcgcgagccggtaggaagggc
tgggcatactcacttgtcacccaatccgaactacccttcctaatggatctacagctgttt
ctatctcggcctctactcacttgtcctctgcctgtcaatgccgattcgagccaaacggat
ttcacgtctagcctggtgatcggaacgatccctcgggaactgctcgatgccgagaccgaa
tatgtgcgagagacattagtttcgcccaactcggccttgatcgccctgggtacggtcgtc
aaacgggctcagaaaatgtacgagaaaagtcaaagtacggcgagtaatgagagctatcga
cggtcgaaggagtttgtactcaatggcaaaggcttcagtgggaccaagaacgaagaggca
tctatccatctcatcttccaaaatcggaaacaagaatctggcggtaagcaagttagacgg
agcgtcaagcgcaccaaaaaagatgaggagactgtacatctcagagaccaactgttggct
aaagtcaaccagttcacacctaatgagaccgtcttcgagatcggtacaaggggtaaaggc
gtcgccgcccagctgatgagggatcgacggaaatcgatgggcaagaagatcgttcgcacg
aaagaggctgctcagctcagagaagagaagtatcaagccgagcagtccatcgatgcaccc
gaaccttccgctaaagcttccctcccgaccaaaaaagtcgctcttgtggctgctaccgaa
ggagaactcgaggaaacattcgagatgccaaggaaaaagacgaaagttaaggaaggcttc
cgagacccagaagcatacctgacgtacgagcagagtggagcagcagctgaaaagggatac
aatttgaatgaagggacttcagcggaattcgtttcacagagtaaattagcattgttcgat
ttagggacaaatgatgaaggaaaattatcatcattatctagcacacaaaaagcatcacaa
gttaaatgggaccgtaaaactaaaaaattcgttaaagtcaatcaattaggtcaagataat
attaaattagttaaaactgaatccggtatgaaattacctgccactttcaaaactggtaca
tttgacaattggaaaaagacttccaaaattaaaattcctaatgtcggtgaacatgaactt
ttgaatacgaatgtattcaatcatcttcatcgtaagtttagacaccaaagtggggctgaa
aatggaccaagaaataaccaagatcatcatcaacatcgtaatggaggtggaggaggagat
catcatcatcaatctagaggtaaaaatgggaacggagtagctggacatgggaaaggagga
aagaaagtattcacgaaaacgatcgatggtcaaaagaaatttttgggaccttcacatgta
gttaccagaggatcatcgacatcaaataaatcacatttctcttccaacaacaatactaat
aaacattcttctaaatctaacttctccggtcataatcgtaatcaacttaaacataattct
aaagatagaaacgccggtgctggcttgaaatctgtagatcaaattcggaaatctagagac
cttaaagaacgtagaaaaatcagatctaatcaaccttctcgtcgtaaaaaatga
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integrated database retrieval system
