Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_004739
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Entry
Pst134EA_004739 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Pst134EA_004739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pstr03041
]
Pst134EA_004739
03032 DNA replication proteins [BR:
pstr03032
]
Pst134EA_004739
Spliceosome [BR:
pstr03041
]
Complex A
U1 snRNP components
Sm proteins
Pst134EA_004739
U2 snRNP components
Pst134EA_004739
Complex B
U1 snRNP components
Pst134EA_004739
U4/U6.U5 tri-snRNP components
Pst134EA_004739
Complex C
U2 snRNP components
Pst134EA_004739
DNA replication proteins [BR:
pstr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
Pst134EA_004739
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin7
SM-ATX
AAA_RNF213_3
YomU_Tube
FlaEY_3rd
Motif
Other DBs
NCBI-GeneID:
72023144
NCBI-ProteinID:
XP_047810275
LinkDB
All DBs
Position
3:complement(<819630..820648)
Genome browser
AA seq
132 aa
AA seq
DB search
MKLIRFLMKLNQETVTIELKNGTVVHGTISGVDVAMNTHLKAVKMTVRNREPQQLDSLSI
RGSNIRYIILPDSLPLDTLLIDDAPKPKKKKDGDARGRGRGRGGGGGGGGGGGGGDRGGR
SRGRGRGRTRGI
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaatcaggtttttgatgaaacttaaccaagagacggtaacgatcgagctcaag
aatggaacggtagtacatggaacgatatctggtgtcgatgtagccatgaacactcatctt
aaagcggtcaagatgaccgttcggaatcgggaacctcaacagcttgattcgctctcgatt
cgtggctcgaacatccgatacatcattcttcctgactctctgcctctggataccttactg
atcgatgacgcaccaaaacccaagaagaagaaggacggtgatgcgcgtggccgaggtcgg
ggacgtggaggcggtggtggtgggggcggtggtggaggtggcggtgatcgaggaggaagg
agcagagggcgtggtcgtggtcggacacgtgggatctaa
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