Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_005156
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Entry
Pst134EA_005156 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_005156
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Pst134EA_005156
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GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Nucleoporin_FG
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
72023560
NCBI-ProteinID:
XP_047810704
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All DBs
Position
3:3168586..3170695
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AA seq
591 aa
AA seq
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MAVCSYFLKGSCKFGNTCRFSHVIDGANKTASNNSLPGPDSFETISRTMQDDLSNEKPLY
CLSVYSPHKSAMNMIDGTDMSPEELRFQAYQARANDTTSQYVAHESQLLQQMDSVIKMVA
QNPRESYKHFYHTQLSLNHPNSTFRKPTPGVNSFGASSFGSSNQPSAFGQATSAFGGSST
GAFGAFSSQGAASTVSAFGQPSSVRPAVSAFGQQTSAFGTAPSTQPGAVTAFGQLSAFGG
SSAPSAFGGSSAPSAFGQPSQFGTASAFGATSQPGATAFGATTSQPGAAAFGATSTQQTG
VTAFGMAAQPTGPSAFGTAAQPTGGSAFGVTSQATGATAFGTNNQSGPNNSVSAFGQTAP
NNPVSAFGQPSNPGASFGQPSLFGQSQAPSAFGKPSAFGQSAFGQSAAFGTPTANLPTTS
ATSAFGQSAFSSSPTPFGQGAPAVVMGTPPNNQAASNGGSGGGFAAFAGVPNPPMTNSFG
NNQATTTPPGPMEDKKPMVTAFRQPTTPTPATTTSSSIFGSSIQPAVAPAQSSNHHQPFG
NQSAQKFKLVDPYWEDAPNETDLSPALLKAFKAGFFSWDLIPDCPPPIALR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctgctcctacttcttgaagggatcctgcaaatttggcaacacgtgcaggttt
tctcacgtgatagatggggccaataaaactgcaagcaataattctttacccgggccggac
agtttcgaaacgatttcgcggacgatgcaagatgacctatcgaacgaaaaaccgctatat
tgcctatcagtctactccccacataaatctgcaatgaacatgatcgatgggaccgatatg
tcacccgaagaattacgttttcaagcttaccaagctcgagccaatgataccacatcccaa
tatgttgcacatgaaagccagcttctacagcaaatggattcagtgatcaaaatggtcgcc
caaaatcccagggaatcctacaagcacttttaccacacccagttatcactaaaccatcca
aattccacttttcgtaagcccactcctggggtgaactccttcggagcgagttccttcggt
tcgtccaaccaacctagcgcatttggccaagccacatccgcctttggggggtcatccacc
ggcgcgttcggtgcatttagctcgcagggtgccgcttcgaccgtgtcggcgtttggacag
ccgtcttcagttagaccggcagtgagcgccttcggccaacagacctcagcatttggcaca
gcgccatccactcagcccggtgcagtgactgctttcggccaactatccgcatttggcgga
tcatcggccccatcagctttcggcggatcatcggcgccatcagcgtttggacagccttct
caatttggaacggcgtctgcctttggagcgacctctcagcctggtgcgacggcctttgga
gcgacaacatcccagcccggtgcggcggcatttggcgccacctctactcagcagactggt
gtcacggcatttgggatggccgctcagccgactggtcccagcgctttcgggacggccgct
cagccgactggtgggagtgcctttggggtgacctctcaggcgaccggtgcgacggctttt
gggacaaacaatcaatccgggcccaacaattcggtgagcgcctttggccaaacagcccct
aacaacccagtcagcgctttcggtcagcccagcaatccgggtgcaagcttcggccaaccc
tctttgtttggccaatcacaagccccttctgctttcggcaaaccgtccgcgttcggccag
tccgccttcggtcaatcggctgccttcggtacaccaactgcgaatctgcctacgacttct
gcgaccagtgccttcgggcaatcagcattcagtagctcacctacaccgtttggccaaggc
gcacccgcagtagtcatgggtacaccacccaacaaccaagccgctagtaacggaggtagt
ggtggcggcttcgcggcttttgcaggcgtgccaaatcctccaatgaccaatagttttgga
aataaccaagcaacaactacccctcctggtcctatggaagacaaaaagccaatggtcaca
gctttcagacagcccacaacacccacacccgctactactacgtcttcttccatctttggc
tcgtctatccaaccggctgtagctcctgcacaaagctcaaatcatcatcagccgtttggt
aatcaatccgcgcaaaaattcaaacttgtcgatccttactgggaagacgctccaaacgaa
accgatctttctccagctctactcaaagcttttaaagctggatttttctcttgggacttg
atacctgactgcccaccccctatagctttacgctaa
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