Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_005244
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Entry
Pst134EA_005244 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Pst134EA_005244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pstr03041
]
Pst134EA_005244
Spliceosome [BR:
pstr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
Pst134EA_005244
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
PRP4
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_like
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
RMC1_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_Vps41
WDR54
Motif
Other DBs
NCBI-GeneID:
72023647
NCBI-ProteinID:
XP_047810799
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All DBs
Position
3:complement(3634557..3637513)
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AA seq
541 aa
AA seq
DB search
MEVDFEDLVTKQIDPNDPNQTRAQAEHAALLTSLDRATRSRQLAVPTNEVAIRVRLRELG
EPMTLFGERPEDRRDRLRYVLSQIAEAKGWELEKEAGTAGMDEGGAEGKDDSESDDDEEF
YTEGSEELLVARRSIADFSLANARKRITRQKLETHLPLSKIMATRKAVYAELKTYTNLGS
QVGDERPISIVRFSPNSRLLATGSWTGTAKVWNVPSCTPYAESKESKNIFKGHSDRIGGL
AWHPGATLSQSTSSVNFITGGADAKVQLWSLDNEQPLRTLEGHGARVCRVAFHPAGRHVA
SSSFDTTWRLWDVETGAELLVQEGHSREVYSLEFQADGALLCSGGLDAIGRVWDLRSGKT
VMVLDGHVKDILAIDFSPNGHQIATGSNDDNIRIWDIRTLKAIYTIPAHTSAVSDVKFYR
APAVPDFKFPYTIDVEGKCKEEKQSAAAYLNGSDRVKLEEGASNENEVEVPLSGLYLASS
GYDGYVKLWSADDWQLIKAMSSEAGGRVMSVDVGCDGKFMASGEWTRTFKLWSAENVSLT
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgactttgaagacttggtcaccaaacagatcgacccgaatgacccaaaccaa
acacgagctcaggcggaacatgccgctctacttacttctctcgaccgggctactcgatcg
aggcaactggccgtgcctaccaatgaggtggcaattcgtgtcaggctacgggaacttggc
gagcctatgacactttttggtgagagacctgaagatagacgcgatcgactacgttacgtt
ttgagtcaaatcgcagaagcaaaaggatgggaactcgagaaggaagctgggactgctgga
atggatgaagggggtgctgaggggaaagatgactcggaatctgatgatgatgaagaattt
tatacagaaggatcagaggaactcttagtcgctagaagatctatagccgatttcagtttg
gctaatgctcgcaagcgtatcacgcgtcaaaaacttgaaactcaccttccactcagtaag
atcatggcgactcgaaaagcagtctatgccgaactcaaaacatacacaaatttaggctct
caggttggggatgaacgtccaatatcaatcgttagattctcgcccaattctcgtttgtta
gccactggttcttggaccggcacagctaaggtgtggaatgtcccaagttgtactccatat
gcagagagcaaggagagtaaaaacatattcaaaggccactccgatcggataggtggtctg
gcttggcatcccggtgccacactcagtcagtcaacttctagtgtgaacttcatcactgga
ggtgcggacgcaaaagttcaactttggtctctagataatgaacagcctctacgaacgctg
gaagggcatggtgcacgggtctgtcgggtcgcttttcatcctgcgggacgacacgttgca
tctagttccttcgatacaacttggcgactctgggatgtcgaaacgggtgctgagctttta
gtacaagagggtcactcccgagaggtctacagtcttgaatttcaggccgatggagctctg
ctctgctctggtggattagatgccattggtagggtctgggatctgagaagtgggaagaca
gtcatggttcttgatgggcatgtcaaagacattcttgccatcgacttttcaccaaacggt
caccaaatcgccactggatcgaatgatgataatatcaggatatgggacatacggacactc
aaagcaatctacacgattccagcccacacctcagcggtgtcagatgtgaaattttaccgg
gcaccagcagtacctgacttcaagttcccatatacaatcgatgttgaagggaaatgtaaa
gaagagaaacagagcgcggccgcttatcttaatggttccgatcgggtcaagcttgaggaa
ggcgcttccaatgaaaatgaagtcgaggtacctcttagcggtctatacctggccagttct
ggttacgatgggtatgtcaaactgtggtctgcggatgactggcagttgatcaaggccatg
tcaagtgaagccggtggaagagtaatgagtgtggatgttggctgtgatggaaaatttatg
gcttctggagaatggacaagaacatttaagctttggtcagccgaaaacgtctcgctaacc
ctatga
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