Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_005426
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Entry
Pst134EA_005426 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pst134EA_005426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_005426
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Pst134EA_005426
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
72023828
NCBI-ProteinID:
XP_047810986
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Position
3:complement(4511125..4513835)
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AA seq
435 aa
AA seq
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MIHGFPQQQQQQSNQSYFRSSPPPNSVQAQPTTTSANQSRTSTTHNFNNLNIGSLISPNL
NSNSHQQRNLLLGALNSPIAPLSASRESYGSLTNNPSSNVQNGSVSRVDTPSLIGPSSVN
TPGSTGLPMNVPSHILTNSSGKLLLSSKHGSPTGAEHPKNSQPENEKIHYLIVDLLNPLT
RESALLELSKKREQWDDLALVLWHSFGVMSCLLQEIVAVYPLLSPPSLTANASNRVCNAL
ALLQCVASHNETRALFLQAHLPLFLYPFLNTTSKTRPFEYLRLTSLGVIGALVKQNDNSE
VINFLLSTEIIPLCLRIMETGSELSKTVAIFIVQKILLDEMGLAYICQTYERFYAVGTVL
SNMVNQLVETQAVRLLKHVVRCYLRLSDNLRAREALRACLPEPLRDATFSQVLKGDLITK
RCLASLLLNLSDRVE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatacacggctttcctcagcaacagcagcagcagtctaaccagtcctactttcgttca
tcgccaccaccaaactcagtacaagctcaacctacaactacctcagctaaccagagcaga
accagcacaactcataacttcaataacctcaacattggatcactcatcagtccaaacctc
aactcaaactcacaccaacagcgtaacttactcctcggtgctctcaacagtccaatcgca
ccattgtcggcttctagggaatcttatggatcacttaccaacaaccctagttctaacgtc
caaaatggcagcgtcagtcgagtggatacgccctcattgattggaccatcctcggtgaat
acccctggttcaaccggtttacctatgaacgtaccttcacacatcttgacaaattcgagt
gggaaattattactatcgtctaaacatggatcacccaccggtgccgaacatcctaagaac
tctcaacctgagaacgagaaaattcattaccttatcgtcgatctactcaacccactcacc
cgagaatcagcccttttagaattgagcaagaaacgtgaacaatgggacgatctagctttg
gtcctatggcactcctttggtgttatgtcctgcttattacaagaaatcgtcgctgtctat
ccacttctatcacccccttcattaaccgccaatgcatccaatcgggtctgtaatgcactt
gcgttacttcaatgtgtagcatcacacaacgagactcgagcgttattcttacaagctcat
ctccccctattcctttatccattcctgaacacgacctccaaaacccgaccatttgaatat
ctgcgattaacatcattaggagtaattggagcattagtcaaacaaaacgataattcagaa
gtgattaacttcttattatctactgaaatcattcctttatgtttaaggattatggaaact
ggctccgaattgagtaaaaccgtggctatctttatcgttcagaaaattttgctagatgaa
atgggtctggcttatatctgtcaaacttacgaacgcttctatgccgtcggtaccgtgctt
agtaatatggttaatcaattggtcgaaactcaggccgttagactcttgaaacatgtcgtt
agatgttacttaagattaagcgataacttacgagcacgcgaagctttgagagcttgttta
cccgaacctctcagagatgctacgttcagtcaagtcttgaaaggagatcttatcactaaa
cgttgcttggctagtttattacttaatctttccgatcgagtcgaataa
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