Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_005474
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Entry
Pst134EA_005474 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pst134EA_005474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_005474
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
Pst134EA_005474
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
72023876
NCBI-ProteinID:
XP_047811035
LinkDB
All DBs
Position
3:4718585..4723645
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AA seq
1052 aa
AA seq
DB search
MTMDRKPSLSGSNATQSGQYFTCLYRKTQTRKNKTWEGDGILCIRGSACYIQSREDGSKV
TSGQWPAEQECVPGKVYMIGGKEVEIDQPMSLQEVEQEGQLSQSDKPATQVPPALPHVPK
VITQVPLKATPKVDLKFRPPMRINGLTRPSNPTQVDKSKYFTKSTLGHTVNGASTTLSSG
LKRTKVECLAHDEIDKLTTGKEPKRFKPLLVKTSESTSGTKPVSEEVNQSQVFICLYRKF
KSSKNSTWDGDGILSLVGSQKGRMAVLKENVTRKVLGSLLLGHIPNLQNGALIQVGSRQV
EIQRPATELEVLDSESNPQESAEADWTDIVKSEAPLNGFKDPMIIKRPINNGPKFDPQAA
GALILTKPTHAWLLKHDLQNAALVDVVVDPTIARSLRPHQIDGLKFMYECTMGLREVGGN
GCILADEMGLGKSIQAISLLWTLLRQNPISGQGPVIKRAMIVCPVTLVKNWKREIHKWLG
RTRLNVFTADGKRDFKQFTSGNYYNVLIIGYEKLRTLSKEVNSTYPPIGLIIADEGHRLR
SIEAKTTQALRSLKTKRRVVLSGTPIQNNLTEYYAMIDFVNPGILEDYRTFRKKFEQPIL
KSREPTCNTVQKLQGQARAEELAKLSRHYVLRRGSEVIQEHLPPRHDYCVFISPTTVQKN
IYQAVLDSPETRAIFSGDISQHLVLMNTLKLLCNSPGLLMNEHSISSLGKISSTLFPAWA
TRDDVELSGKLIALAKFLSILRKKNEEKIILVSNFTKTLDIVESHCKASNYSYCRLDGKT
AQNQRDNIVQVFNRSSPSAQFVFLLSSKSGGVGLNLIGASRLILFDGDWNPATDLQAMAR
IWRQGQEKPCHIYRFLTTGTIDECIFQRQVTKIGLASDLMNVPKAGEETTGGGNTFTKSE
LKRVFELHSNTNCYTHDLLECQCLEHKSSEEPEGWNESDDQLEDPMAWLDNSGSDGSLHD
FDLGGFIPASKFNPLDTEKDALKLKRKLVELEKWVHLNATDPKSIDEIEDQILHQIVSAM
NPNLDSNPEESTKDDQTSKDGIVTFIFTKSIG
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggataggaagccaagtttatcgggttcgaacgcgactcagtctgggcaatat
tttacttgtctctaccggaaaactcaaacgcgtaaaaataagacttgggaaggcgacggg
atcctttgcattcgaggttctgcgtgctacatccaatctcgtgaggatggatctaaagtc
acatccggtcagtggccggctgagcaggaatgtgttcccgggaaggtttatatgattgga
ggcaaagaggtcgaaattgatcagcccatgtctctgcaagaggtggaacaggaaggtcaa
ttgagtcaatcggataaaccagctacccaggtacctccagcccttccgcatgttcctaaa
gtcattacccaagtgcccctcaaagcaacccctaaagtcgatctcaaattcagacctccg
atgcgcatcaatggcttaactcggccatcgaaccccacccaggtcgataaaagcaaatac
ttcacgaaatcaacccttggtcatacagttaatggcgcttccactacgctctcgagtggg
ctaaagcggactaaagtagaatgtcttgctcatgatgaaatagacaagttaactacggga
aaagaacctaaaagattcaaacctctcttggtcaaaacctcggaaagtacatctgggact
aagcccgtctcggaagaggtaaatcaaagtcaagttttcatttgtttatatcgcaaattc
aagtcctccaaaaactcgacttgggatggggacggtatcttatcactagtggggtcacaa
aagggtcgaatggctgttttaaaagagaatgtcactcgtaaagtactgggaagtttactc
ttgggacatattcccaacctacaaaatggcgcattgattcaggtcggaagtcgacaagtt
gaaattcagagacctgccactgaattagaggtgttggattctgaatcaaatccccaggag
tcagctgaggctgattggactgacattgtcaaaagcgaagccccactgaatggcttcaaa
gatcccatgatcatcaaacgccccatcaacaatggtccgaagtttgaccctcaagccgca
ggcgcgttgattttgacgaaacctactcacgcatggttgttaaagcacgatcttcagaat
gctgcgctcgttgatgtagtggttgatcccactattgcgcgatcactcaggccacatcaa
atcgatggacttaagttcatgtatgaatgtactatgggacttcgcgaagtcggtggtaac
ggctgtatcctagcagatgagatgggtctgggaaaaagtattcaagcaatttccttacta
tggacgcttttacggcaaaaccctatctcggggcagggaccagtcatcaagagagcaatg
attgtttgtccagttacattggtcaaaaactggaagagggagatacataaatggcttgga
agaacccggttgaatgtatttacagctgacggaaaacgcgacttcaaacaatttaccagt
gggaattactataacgtgttgatcattggatatgagaaactgcgaactctctcgaaagag
gttaactctacttaccccccgatcggtttaataatcgctgatgaaggtcaccgcttgagg
tctattgaagccaaaacgacacaagctttacgatccttgaaaaccaagcgacgagtggtt
ctgtctggaaccccgattcaaaacaatctcactgaatattacgcgatgatcgattttgtg
aatcctgggatcttagaggattatcgaacattcaggaagaaatttgagcaaccgatatta
aagagtagagagcctacttgtaatacggtccagaaattacaaggccaagcccgagcagaa
gaactggcgaaattgagtcgacattatgttttgagaagaggctccgaagtcatccaagaa
catcttccacctcgacacgattactgcgtctttatttcccccacaaccgtccaaaaaaac
atttaccaagccgtattagactcacccgaaactagagccatcttttcgggcgacatcagt
caacatcttgtcctcatgaatacgttaaaactactttgtaattcgcccggattgttaatg
aacgaacattctatttcaagcttaggaaaaatttcctcaacattatttccagcttgggca
actcgtgacgacgttgaactttcaggtaaattaatagcgttggccaaatttttatccatc
ctgagaaagaagaatgaagagaagattatcttggtatctaacttcactaagaccctcgac
atcgttgagagtcattgtaaggcgagcaactactcatattgtcggctagatggcaaaacg
gcgcaaaatcaacgagacaatattgtccaggtcttcaaccgatcatctcccagcgcccag
tttgttttcttacttagtagcaagtccggcggagttggtttgaatttgatcggggcctcc
aggttgatcttgtttgatggggattggaacccagcaacagacttacaagcgatggcacgc
atttggagacaaggacaagaaaaaccatgtcatatctatcgctttctcactacaggtacg
attgatgaatgcatctttcaacgacaagtgacgaagattggtttagcatcagatttgatg
aatgtccctaaagcaggcgaagaaacaactggtggtggtaacacgttcacgaagagtgaa
ctgaagagagtatttgaattacatagcaatacgaattgttatacccacgatttacttgag
tgtcaatgtttagaacataaatcaagtgaggaaccggaaggatggaatgaatccgatgat
caattagaagatccaatggcttggttagataactccggttcagatggatctctgcatgac
tttgacttgggtgggttcatcccagcttctaagttcaatccattagatacagaaaaggat
gcgttgaagcttaaacgcaaattggtcgagctcgagaaatgggttcatttgaatgccacc
gatcctaaatcgatcgatgaaatagaagaccaaattcttcatcagatcgtttccgctatg
aacccaaacttggacagcaaccccgaggaatcgactaaagatgaccaaacgagtaaagat
ggtatagtcacttttattttcactaaatcaatcggatag
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integrated database retrieval system
