Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_005486
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Entry
Pst134EA_005486 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03013
Nucleocytoplasmic transport
pstr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Pst134EA_005486
03015 mRNA surveillance pathway
Pst134EA_005486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_005486
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Pst134EA_005486
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_3
RBD_AKAP-17A
RRM_occluded
DUF4309
Motif
Other DBs
NCBI-GeneID:
72023888
NCBI-ProteinID:
XP_047811048
LinkDB
All DBs
Position
3:complement(<4769316..>4770569)
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AA seq
350 aa
AA seq
DB search
MASARGRSASPKPLRTENQAPKSEPQDDAVPNGIKKAKASPRSRSASGSRRSSRGASPKI
RHSDSRSMSLSRSSSENRSRSRSYSRSRSRSPRRTRARSYSGSPSRSRSRSRSGSYSSYS
SRSDSRESIGRNGGGSKLVEVSKLTKNVTAEHIQEIFKVYGTIKEVDLPIVRQIGSHRGT
AIVTFDTGKAAQKAVSHMDRGQLDGSLISVQIYRPPSPPRGPAAQGRGINSNRVTSGNGA
RYIAPRAPNAARRNASPPRRAFGGRSRSPPRRSFANSRPAAGRSNRSQSPPSYRRKRSRS
RSPSRSPRRGVRRPSPQYGARSSRRNRSYSGSGSSSYTRSSRSRSRSPRK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagctcgtggtcgatcagcttcccccaaacctctcagaaccgaaaatcaggcc
cccaagtcagaaccacaagatgacgctgttccaaacggtatcaagaaagctaaggctagc
cctcgatcaaggtcggcctcaggatcaagacgaagcagtcgtggagctagtccgaaaatc
agacattcggattcgaggtcgatgagtttatctcgatcgagttcagagaaccgatccaga
tcacgttcatactcgagatccagatctcgatctcctcgtcgaactcgtgcgaggtcttac
tctggctcgccttctcgttctcgttcccgatcgcgttcaggatcatattcttcatactca
tcaagaagtgactcccgagaatctattggtcgtaatggtggcggatctaagctagtcgaa
gtctctaaacttactaaaaatgtgactgctgagcatattcaagaaattttcaaggtttat
ggtaccatcaaagaagttgatttgccaatcgtcaggcaaattgggtcccatcgtgggact
gctatcgtgacgttcgataccggcaaggctgcacagaaggcagtcagtcacatggatcga
ggacaattagacggctccctgatctctgttcaaatttatcgacccccatcccctccacga
ggtccagctgcacaaggacgaggtattaattccaatcgagtcacatctggcaatggagct
cgatacatagcaccccgagctcccaacgcagctcgccgtaatgctagtccaccgcgtcga
gcatttggaggcagaagccgcagccctcctcgacgaagctttgccaatagccgacctgct
gccggtcgctccaatcgatcacaaagtccgccttcttaccgtcgcaaacgatctcgatct
cgaagtcctagccgtagcccacgacgtggcgtcaggcggcccagtccacaatacggtgcc
agaagctctcgtagaaatcgctcttactctgggagtggctcctcgagctacactcgatct
agtcgttcgagatcccgaagtcctcgcaaatag
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