Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_005609
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Entry
Pst134EA_005609 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_005609
04131 Membrane trafficking [BR:
pstr04131
]
Pst134EA_005609
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
Pst134EA_005609
Membrane trafficking [BR:
pstr04131
]
SNARE
SNARE associated proteins
Others
Pst134EA_005609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
DUF1765
DUF4508
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
72024011
NCBI-ProteinID:
XP_047811184
LinkDB
All DBs
Position
3:5354413..5358900
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AA seq
800 aa
AA seq
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MASSLAPHPPNSSNRSSSPSGLQSNLRANNVYRHQHSSSTSTPGNQHFGSVFNNYGGARS
AGGPRQSLDVTRSMAVNGPISPRPPGLTQLRPNSEILSASGGFGGAAGGTNGQHVNQGES
GESEAIDKWFEDLQSYEATLEEMAAASLDVNFKEELSAIEQWFRVLSEAERTAALYSLMQ
SSTQVQIRFFITVLQQMARSDPMMSMLSPALNPATPSMEQQMEAKLSQLSMKSPASPLVR
QFAHQSLTPNVNVTSTENFLSPNSAMFNESNNTSNEAANLLSAQRAKLNAKAANRLSAPG
QLLSASNSLKSPKWNTVPGPVEEETNSRAPSPRPKSNGAEFGNSSQNTLHPGFACSVTSG
IESQLSPIMGGSWASQVNTPLVAMFGHKDKVNSQSIDVTTQNVSDASNRLAQWGAAHQAG
SNGASQTGSSNHAQPQNSSLNGFPLDDARKFRRQSKCAAADGSAGFSGVLSGLNTNNNSV
GSNQGNNLLTNSTNQSATQTRLPNPPRSAISNGAPLPSPMNPQSMLGAQKAAVAAQQNWR
QGLNSAPLPPMNQNDPAMLKDLAMMNQLAAGLNGGINGMNMNGMANLAAMANSMADPGSL
QNMANLLNMRQQIQQVHNLQSLQQQLQQSGMMSGGSMASPGSARFGMNFGFPMMSASSNG
MGNKRSPAGRGAGKPTHTPGSGSNPEEDLDMKLLNDIPAWLRGLRLHKYTPNFAGCTWQE
MVLMSDATLEARGVAAVGARRKMLRTFETVRIIKGMALPGDGDSKSAAPTNNTDSPEAEP
SSEQTDTAPAPESDKDSNKY
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccctagccccccacccacctaattcctccaatcggtcttcctccccctcg
ggcctacaatcgaatctcagagccaacaacgtgtatcgtcaccagcactcctcttcgacc
tctacccctggcaatcaacactttggatcggtttttaataactacggcggcgcacgaagc
gccggtggtcccaggcagagcttagatgtcaccagaagtatggctgtcaacggcccgatc
agccctcgcccccctggtttaactcaacttcgacccaatagcgaaatcttgtcagccagt
ggtggttttggtggtgctgccggtggtaccaatggtcaacacgtcaaccaaggcgaatcc
ggtgaatctgaagcgatcgacaagtggtttgaagatttacaaagttacgaagcaaccctg
gaggagatggctgctgccagtttggacgtcaatttcaaagaagagttgagcgccattgaa
caatggttcagagttcttagcgaagctgagaggactgcagcgctatactcactgatgcag
tcttctacccaagttcaaatccggttcttcattaccgtattacaacaaatggctcgcagt
gatcctatgatgtcaatgctcagtcccgcgttgaatcctgcaactccttcaatggaacaa
cagatggaagccaagctctcgcaacttagcatgaagtcacccgcctccccgcttgtccgc
caattcgctcatcaatcgcttactcccaacgtcaatgtcacttcgactgaaaacttcctc
agtcccaactcggctatgtttaacgagtcaaacaacacctcgaatgaagctgccaacttg
ctttctgctcagcgtgccaagctcaatgccaaagctgccaatcgactctccgcccctggt
cagctcttgagtgctagcaacagcctgaagagcccaaagtggaacaccgtcccgggtccc
gttgaagaagaaactaacagtcgagcccccagccctagacccaagtccaatggcgctgag
ttcggcaacagttctcaaaacacccttcatcccggattcgcttgctctgttacgtcagga
attgaatcacaactcagtccgatcatgggtggaagctgggctagccaagtcaacactcca
ctcgtcgccatgttcggccacaaagacaaggtcaacagtcaaagtattgatgtcactacg
caaaatgtcagcgatgccagtaaccgacttgcccaatggggcgccgcccaccaagcaggg
tccaatggcgcctctcaaaccggatcgtcaaaccacgcccaaccgcaaaattcttcattg
aatggctttccgttagacgacgctcggaagttccgacgacaaagcaagtgtgctgctgct
gatggctctgctggtttctcgggcgtcctcagcggtttaaacacaaacaacaatagcgtg
ggctccaatcaaggaaataaccttctgaccaatagtaccaaccaatctgctacccagacc
cggctccccaacccccctcgctctgctatcagtaatggagcgccgttaccaagcccgatg
aacccacaatccatgctgggagctcaaaaggctgctgtggccgcccaacagaactggcgc
caaggcttgaacagtgcacccttaccacccatgaaccagaacgatccagccatgttgaaa
gacctcgccatgatgaatcagctcgctgctgggctcaacggtggaataaacgggatgaac
atgaatggtatggcgaacttggcggctatggcaaatagtatggccgacccaggctcctta
cagaacatggccaatttgttgaacatgcgtcaacagatccaacaagtccacaatctccag
tcgcttcaacagcaacttcaacagagcggcatgatgtcaggtggttcgatggcctcacct
ggctcggcacgatttgggatgaacttcgggttcccgatgatgtcagctagctctaacgga
atgggtaacaagcgaagtccagccggtcgaggtgccggaaaaccgacgcacacccctggt
tcggggtcgaatccggaagaagatctagacatgaagctcttgaacgacatcccggcatgg
ctccgaggcttacgcttacacaaatacacgccgaactttgctggttgcacttggcaagag
atggtgttgatgagcgatgcgactctcgaggctcgcggggtggctgcagtcggtgcacga
cgaaagatgctgagaactttcgagactgtcaggatcatcaaaggaatggctttacccggt
gacggcgatagcaaatctgcggctcctactaacaacaccgatagccctgaggccgagcca
agctccgaacaaactgacaccgctcctgctcccgaaagtgataaggattcgaacaaatat
tga
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