Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_005628
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Entry
Pst134EA_005628 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pstr03016
]
Pst134EA_005628
Enzymes [BR:
pstr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Pst134EA_005628
Transfer RNA biogenesis [BR:
pstr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
Pst134EA_005628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
PilA4
Motif
Other DBs
NCBI-GeneID:
72024030
NCBI-ProteinID:
XP_047811199
LinkDB
All DBs
Position
3:complement(5415760..5417498)
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AA seq
337 aa
AA seq
DB search
MEIDSEKPPVGGLRRRPATSPIGPPIPIYISNGEAYIWAIDQVERLRIDHQISGLLTGTL
PQLAQQNVFLGLPLQLIPEEVVVLVELGIAVLVDDLRSHRHATLEESVEYQTKRDQEIEE
EQRLAVIRDAERRAAAQEVYRSQIKAAEEKRQARQQQQQPQKSQQLEGRSDNPVEIQQGM
IPTDNADDAKPISNNTSQVAYFIPIHLQSQPPTHSPEGSNVFRELEPARKAGLWTYPNDQ
YQKARCAVFSALWRQGMFLGIGLKFGCDFLVYPGDSLRFHSHFACTVIQDPHKSIAPLSL
VSYGRLATAVKKSHLLACWDESTQAVKFLSLEWAGMG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgattctgagaaaccaccggtaggagggttgagaaggaggcccgcaacttcg
cctatcggtccaccgatcccgatctacatctcgaatggagaggcatacatctgggcaatt
gaccaggtcgaacggttgaggatcgatcatcagatctccggtctcctcaccggtacttta
ccacaattagcccagcagaacgtgttccttggattgccgttacagctcataccagaggaa
gttgtggtactagtagaattgggcatagcagttctagttgatgacttgagatcgcatcga
cacgcgacactcgaagaatcagttgaataccaaaccaaacgggatcaggagatcgaagag
gaacagcgcttggcggtgatccgggacgccgaacgccgagcggctgcccaagaagtttac
cgatctcagatcaaagctgcggaagaaaagcgacaggctcgacagcaacagcaacaacca
caaaaatctcagcagctggagggtagatctgataaccctgtagagattcagcaaggcatg
atcccaactgataatgcggatgatgccaaacccattagtaacaatacctctcaagtggct
tacttcatacccatccatctccaatctcaaccacccactcactctcccgagggctcaaac
gtctttcgtgaactggaacctgcacgaaaggccggtctatggacttatcctaatgatcag
taccaaaaagcaagatgtgccgtcttttcggctctttggagacaaggaatgttcttgggt
atcggcctcaaattcggttgcgactttctcgtgtacccgggcgactctctaagattccat
tctcatttcgcctgcacggtaattcaagatccccacaagtcaattgcacctttatcacta
gtttcctatggaagactagcaacagccgtcaagaagtctcatttactggcatgttgggat
gagagcactcaagccgtcaagttcctgagtctcgaatgggctgggatgggctga
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