Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_006901
Help
Entry
Pst134EA_006901 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_006901
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
Pst134EA_006901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_C
TPR_14
HAT_PRP39_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
72024241
NCBI-ProteinID:
XP_047809065
LinkDB
All DBs
Position
4:complement(843800..848691)
Genome browser
AA seq
842 aa
AA seq
DB search
MKELGLVGLRARVTDADQEAINRHVQGTSDLKITYLKRALRESSNQDNEQLLLAYMKAYC
DQPDLDLAKEWQRILEAHPAVTGLWIAYVDWKQTEAGSLNVLEMVEVYEELIDRLVRRSE
NPNTLEKERTMFEQSIVYLFHRCCVMLKQAGYTDRATAAFQAIMEINFFRPDQKIYSLNE
LVDDFEMFWDSEVPRIGEDGGQGWKNMDLDSEPLETGAGSCLPAESKEIEPNSTEQIYDR
WQAREMKAHRPLRTTDLQDDEDPFACILFDDIRNLLFLLSTDDSLQALLYSFLSFVGVSI
PPPDIDTNVPFFTDPFLSTELIDVPERQSTFWPQSIESKPSFDPYGPSERLSGIKKPQMI
PFRIFPYDIRQLFADRSRWFVNFQPPQDLINMIRNSFQALRTTESLKQDTYFKLCELSFE
ARLDVPSAVKLAKQSLSLDQRNLVLWDAYARLCLLQSKPKQARDVYVKTLEMSEQGNQEL
MCLWCSWAEMEFQLGHFRLVISILARAMNCLDESPSELVQNTSQPRSPALLLRVRRAFIG
HLAGSFQDDVPLTLLRSRISVGVGYGTFEYITEGFEAGCSAYEFSLKALNGLDSPAEEEE
LWLSYSKLIYQQIVDHQRFKPIQIREILQRAIVKFPNNSIFLAIFAFNESKMKIQNHTRR
LIDSILLNNNTNGNNLVVTVNRWLFAIWVELNLNSSTFNQAAVRSLFERALTNQSIRACL
QMWILYIEFEIRNQNYDRARSLIKRSIAHCPWSKELYLLQFTSRFEDTHGPKSKTNQSIE
CKRMIRLIDEKSIRIRDRSVFKGLENLQPGSTSSHVFGLDDDDDDDDREQLEFDERRKLL
PY
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcttggactggttgggttgagggcgcgagtgacagatgcggaccaagaggcg
atcaatcgacacgtacaaggcacgagtgatttgaagatcacatacctgaaacgagcgcta
cgtgaatcatccaatcaagataatgaacaattactactcgcctacatgaaggcgtattgc
gatcagcctgatctcgatctcgccaaagaatggcaacggatcttagaggctcatcccgcc
gttactggtctgtggatcgcttatgttgattggaaacaaactgaggctggaagtctaaac
gtcttggaaatggtcgaagtatatgaagaattgattgatcgtttggtcaggcgatcggaa
aaccccaacactcttgaaaaagaacgtaccatgttcgaacaaagcatcgtttacctattt
caccgatgttgtgtgatgctcaaacaagcagggtacaccgacagggcgacagcagctttc
caagctatcatggagatcaactttttcagaccggatcaaaagatttattctctcaatgag
cttgttgatgatttcgagatgttctgggattctgaggttcctaggataggggaagatggc
gggcaaggttggaagaacatggacttggattccgaaccattagagactggagctggaagt
tgcttaccggctgaatccaaggagatcgaacccaactccacggaacagatatacgacaga
tggcaagctcgggagatgaaagcacatcgaccacttcggaccactgatctccaagatgat
gaagacccattcgcttgcatattatttgacgatattagaaatttactgtttttgttatca
acggatgactcgcttcaagcccttttatactcatttctatcattcgtaggagtttcgatt
cctccacctgacatcgatactaacgttccctttttcaccgacccatttctatcgaccgag
ttgatcgatgtacccgaacgacaatccacattttggcctcaatccatagaatccaaacct
tccttcgatccttacggtcctagcgaacgtttatcggggatcaagaaaccacaaatgatt
ccctttcgaatctttccttacgatatccgacaactctttgctgaccgatctcgatggttt
gtgaactttcaaccacctcaagatttgatcaacatgatcagaaactcatttcaagcctta
cgaacgactgaaagtttgaagcaagatacatacttcaaactatgtgaactttcctttgaa
gctcgacttgacgttccatcagcggtcaaactcgccaaacaatccttgagcctcgaccaa
cgaaacttggtactatgggatgcttatgccagactatgtctattacagagcaaacccaaa
caggccagggatgtctatgtgaagacgctggagatgtctgaacaggggaatcaagagctc
atgtgcctctggtgttcatgggcggaaatggaattccaacttggccactttcgattggtg
attagtattttagctcgagctatgaattgtttagacgagagtccatcagaactcgtacaa
aatacatctcaacctaggtcgcccgctttattgcttcgggtccgacgtgctttcattggc
caccttgccggctcttttcaagacgacgtaccacttacattattacgtagtcgaatatca
gttggagtaggatatggaacatttgaatacataacggaaggatttgaagcaggatgttcg
gcctacgagttcagtttgaaagcattaaatggattagatagtccagcagaagaggaagaa
ttatggttaagttattcaaaattaatttaccaacaaattgtagatcatcaacgatttaaa
ccaattcaaattagagaaatccttcaacgtgcaatcgttaaattccctaataattctatc
tttcttgcgatctttgcgttcaatgaatctaaaatgaaaattcaaaatcatactcgtaga
cttattgattcaatcttactcaataataatactaatggtaataatcttgttgttactgtt
aatcgttggttgttcgctatttgggtagaacttaatcttaactcttcgacgttcaatcaa
gctgctgtacgtagtttattcgaacgagctttgaccaaccaaagtattagagcgtgttta
caaatgtggattctttatatcgagtttgagatcaggaatcaaaactatgacagagctaga
tcattgatcaaacgttcgattgcacattgtccctggtcgaaagaactatacttgcttcaa
ttcacgagtcgattcgaggacactcatggaccgaaaagtaaaaccaatcagtcgattgaa
tgtaagagaatgatccggttaatcgatgagaaatctattcggatcagagatcgttctgtt
ttcaaaggattggaaaatctacaacccgggtctacttcttcccacgtttttggacttgat
gatgatgatgatgatgatgatcgtgaacaacttgagttcgatgagagacgtaaactcttg
ccttattga
DBGET
integrated database retrieval system
