Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_007349
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Entry
Pst134EA_007349 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Pst134EA_007349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_007349
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
Pst134EA_007349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
DUF4028
Motif
Other DBs
NCBI-GeneID:
72024689
NCBI-ProteinID:
XP_047809535
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All DBs
Position
4:complement(3359754..3361156)
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AA seq
205 aa
AA seq
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MTSTITLYPLSNYTFSTKEAQPEEDPSVTSRLQRLQNNYEDFGMRRTVEGILVVHEHGHP
HVLMLQIANAFFKLPGDYLRPGEDDVEGLKERLDDRLAPPSGQFGAGLTSAQGQKDWEIG
DCLSQWWRPNYESFMYPYVPAHITKPKECKMLYLVQLPEKKVLSVPKNMKLLAIPLFELY
DNPQRYGPQLAAIPHVLSRFSFIYA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacatccacaataaccctatacccgctctcgaactatactttctcaactaaagaggct
caaccagaggaggatccttcagtaacttctagattacaacggctccaaaataattatgaa
gacttcggtatgcgtaggacggtcgagggtattcttgtagtgcatgaacacggtcatcct
catgtattgatgcttcaaatcgcaaacgctttcttcaaattgcctggtgattatcttaga
cccggtgaagatgacgtcgaaggtcttaaagaaagattggacgatcgtctcgctcctccc
tccggtcaattcggcgcgggtttgacgagcgctcaagggcagaaagattgggaaatcggc
gactgtttgtctcaatggtggagacctaattatgaaagttttatgtatccttatgtgcct
gctcatatcacgaaaccaaaggaatgtaaaatgctctatctagttcaacttcccgaaaaa
aaggttttatcggtacccaaaaatatgaaactcctagctattcctctattcgaattatac
gataatcctcaaagatacggtcctcaattggctgccattcctcacgtactctcacgcttc
tcattcatctatgcataa
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