Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_007569
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Entry
Pst134EA_007569 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03013
Nucleocytoplasmic transport
pstr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Pst134EA_007569
03015 mRNA surveillance pathway
Pst134EA_007569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_007569
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pst134EA_007569
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Pst134EA_007569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
72024909
NCBI-ProteinID:
XP_047809757
LinkDB
All DBs
Position
4:4461124..4464288
Genome browser
AA seq
503 aa
AA seq
DB search
MADSTPADELGSLVSRLSALDPKATEDNIAQVESLGLKPTTIDEPEAVPAADPTSPTVDA
NEAKTKSKASELLENLSHQVEIKLADQQADPNSPLYSAKSFEDLNLDPALLKGLYRMGFQ
RPSKIQERALPLLLQNPPRNMIGQSQSGTGKTAAFVLTMLSRVDVSKNCPQAICVCPSRE
LARQIMDVAEQMGQYVTGLTKRLASKDTLERGVKITDHIIVGTPGTIKDALTSHRVSGTR
ESVIDPSGIKVLVADEADVLVGTGSLGEQTIGVKNAITRSNTTTQIVLFSATFPEHVRKY
ASKFAPNANEIKLKKDELTLEGIKQFYMDCNNVEHKYEVLVELYHLLTVGQSIIFAQERR
TADEIARRMNQDGHKVAVLHGAQMGEGRDQTIDDFREGRSKVLVTTNVVARGIDISQVNL
VVNYDLPQDPQKGADAETYLHRIGRTGRFGRKGISINFIHDPRSYQDMMKIKDELQISDE
QLVKVDTKDFDDMEKTLKAALKA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcaactccagcagatgaactcggcagcctggtctcaagactatcggcactc
gacccaaaagccacagaggacaatatcgctcaggttgaatcccttggactcaagccaacc
acaatcgacgagccagaagctgtacctgcagcagatcccacatctcccaccgtcgatgcc
aatgaggccaaaacaaagtcaaaagcctctgagcttctcgagaatttgtcacatcaagtt
gaaataaaactagcagaccaacaagccgatccaaactcaccactgtattcagctaaatca
tttgaagatctcaaccttgatccggcccttttgaaaggtctttacagaatgggtttccaa
agaccctccaagattcaggagcgcgccttacctttgttactacagaatcctccgaggaac
atgataggacaatcccaatctggaacaggaaagacagcagcgtttgtcttgacgatgtta
tcgagggtggatgtttctaaaaactgtccacaagcaatctgtgtctgtccatcacgcgaa
ttggcacgtcagatcatggatgttgccgaacaaatgggtcaatacgttactggtttaact
aaacgtttggctagtaaagatacccttgaacgtggtgttaagatcactgatcatatcatt
gtgggaactcctggtacaatcaaagacgctctaacttctcatcgagtttcaggcacacga
gagtcagtgattgatcccagtgggattaaggttttagttgcggacgaagccgatgtacta
gtaggaacaggctcactgggagaacaaacgatcggagtaaaaaatgcaattacccgtagc
aatacaaccacccagatcgtcctattctcggctaccttccctgaacatgtacggaagtat
gcgtccaaatttgcaccgaatgcgaatgagatcaagttgaaaaaagacgagctcacactt
gaagggatcaagcaattttacatggattgtaacaatgtagaacataagtatgaagtttta
gtagaactttatcacttattaacagttggacagtcgataatatttgcccaggagagaaga
acggcagatgagattgcacgccgaatgaaccaggatggacataaggttgcagtcttacat
ggagcacagatgggtgaaggaagagatcaaacaattgatgacttcagagaaggtagaagt
aaagtacttgtgactactaacgtggtcgctagaggaattgacatctctcaagttaacttg
gttgttaactacgacctacctcaagatcctcaaaaaggagctgatgctgaaacttactta
catcggattggaagaactggtagatttggacgcaaaggaatctcaataaacttcattcat
gacccaagaagttatcaagatatgatgaagattaaagatgaattacaaatctcagatgag
cagttagttaaagtagataccaaagattttgatgacatggaaaagactctcaaagctgca
ttgaaagcatga
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