Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_007694
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Entry
Pst134EA_007694 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pstr04131
]
Pst134EA_007694
04121 Ubiquitin system [BR:
pstr04121
]
Pst134EA_007694
Enzymes [BR:
pstr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Pst134EA_007694
Membrane trafficking [BR:
pstr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
Pst134EA_007694
Ubiquitin system [BR:
pstr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Pst134EA_007694
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_11
Zn_ribbon_19
zf-C3HC4_3
zf-rbx1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
72025034
NCBI-ProteinID:
XP_047809891
LinkDB
All DBs
Position
4:complement(5084197..5086456)
Genome browser
AA seq
489 aa
AA seq
DB search
MSNRWYCHACQLPFIEPVDPQDPQCQNCHSSFVEEINEQQPQAHHHFIDSFDDVDSPPIP
STRQRYEQQQQQQQQQQQLPFINLIDPLINILSAPAIPDPADRDQPNVNTQSHRSGGPLA
FNNLTDFLAQHSHTFGAHQFTNRSTPSTTQDPRPRQPATTQESNNTTPPPPQQQQQQQQP
VTGILSLLQSAFAFANSNSTTPETETEPRRSESNNSADRSRSSNGQQSSSSSSGPSTGDN
PSSSRPAEPTRPTPRSPRVNLEESHPLRQFINILNSLNNNNPTDHTIHTNGVNSFVFNGG
TTGFGFSSTVNNDTGDYVTSDSAMHDILNQLLQLSGNNLNPNGHQNPVPASDSIIQSLKK
FTFDSNRLGSDEENIECAICKDTFIFEQECLELPCKHFFHDSTCIVPWLKQNGSCPVCRY
SLINNQSSSSSSGTDDNVGGNQPGNRSNNDVPASSTEEEAEDAQYRPDLHDWLDPDQWYD
QQEAPFDYD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcgatggtactgccacgcttgtcaactaccgttcatcgaaccagtcgatcca
caagacccacaatgtcagaactgtcactcgagcttcgtagaagaaatcaacgagcaacaa
ccacaagcacatcaccacttcatagactcattcgatgatgtggatagtccacccattcct
agtaccaggcagagatacgagcaacaacagcaacagcaacagcaacagcaacaactaccc
tttatcaatctcatcgatcctctcattaacattctctcagctccggcgatccccgatccg
gctgatagagaccaacccaatgttaatactcaatctcacagatccggtggtccacttgct
ttcaataacttgacggacttcctggctcaacattctcatacatttggagcccaccaattc
accaatcgatcgactccatctactactcaagatcctcgtcctcgtcaacctgcgactact
caggaaagtaacaacactactcctcctcctcctcagcagcaacaacaacaacaacaacct
gtcactggaatattatcgttacttcaatctgcctttgcatttgcgaactctaatagtacg
actcctgaaactgagactgaaccaaggagatcagagagtaacaatagcgccgaccgaagc
agatcgagcaatggccaacaatcctcctcctcatcttcaggacctagtacaggagataat
ccttcttcttcaagaccagcagagcctactcgaccaacgcctagatcgcctagagttaac
ttagaagaaagtcatccattacgacaattcattaatatcttgaattcactcaacaataac
aatccaacagaccatacaatccatactaatggagtcaacagtttcgtcttcaatggtgga
actactgggttcggttttagttctactgtcaataatgatacgggcgattatgttactagt
gactcggctatgcatgatatcctcaatcaattacttcagttatctggtaataatttgaat
cctaatggtcatcaaaatcccgttcctgcgtcggattctatcattcagtctttaaagaaa
tttacattcgattcaaatcgtttaggttcagatgaagaaaatatcgaatgcgctatctgt
aaagatactttcatttttgagcaggagtgtttggagttgccttgtaaacacttctttcat
gattctacttgtatcgttccatggttaaaacaaaatggatcttgtccagtttgtcgatat
tcactgatcaataaccaaagtagtagtagtagtagtggaactgatgataatgtaggaggt
aatcagccaggaaaccggtctaataatgatgtcccagcttcctcgacagaagaagaagca
gaagatgctcaatatagacctgatcttcatgattggctcgaccctgatcaatggtatgat
caacaagaagctccattcgattacgattga
DBGET
integrated database retrieval system
