Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_009168
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Entry
Pst134EA_009168 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_009168
Enzymes [BR:
pstr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pst134EA_009168
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pst134EA_009168
Prokaryotic type
Pst134EA_009168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
T6PP_N
Motif
Other DBs
NCBI-GeneID:
72025454
NCBI-ProteinID:
XP_047808088
LinkDB
All DBs
Position
5:complement(996033..998962)
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AA seq
587 aa
AA seq
DB search
MVKRAIQEEDDSKNLRASKRTNLAEEETPYKHLLRLIEEGEEEKQQPRKESKDGVIVYWM
RMRDLRLTDNRALSLASQLAHSRNLHLVVLHILSTQDFKAHDRSPRRIDFVLRNLIDLKS
RLRALDIPLHTLTIHERHSIPDQIIQILKTWNASHLTANIEHEVDELRRDIQVLELAKKN
QIQVRLVHDTCIVEPGKVLTKENKAYSVFGPWQRNWANLVNSNLDEYIGKSEDCKPNNAC
IKDIKTLNDLFDSEVPASLPGFELSEQDSLVMNENWKAGEKAAEDLLNRFLNTKLEPEKK
EIQTTLTGKASPPKKKEESTIVQEYSTLRNRPDLPGTSRLSAYLAAGVISPRACIRASMQ
IAEKGKKAVNGLQVDRRDLGVGVWQSEIGWRDFYQHVMAAWPRVSMGKAFNQKYEKMVWE
YDEQTFQKWKDGLTGYPFIDACMRQLKHLGYMHNRGRMCVAMFLTKDLMMDWRLGEKWFM
ENLVDGDLGSNNGGWQWSASTGTDPQPYFRIFAPLSQSEKSDPDGDFIRHWVPELKSLNA
KQIHAPFDKLSIEKFKSLKYPKPIVDHSVVRKRALARYKNPGCADNE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaacgagcgattcaagaagaagacgatagtaagaatttacgagcgagtaaaagg
acaaatctagcagaagaagaaacaccgtataaacacttattgagattaatagaagaagga
gaagaagaaaaacaacaaccaaggaaggagtcaaaagatggggtgatagtctattggatg
agaatgagagatctaagattaaccgataacagagccttatcacttgcttctcaattagct
cattctcgtaatctccatctcgtcgtactccatatactctctactcaagactttaaagcc
cacgaccgttctccaagaagaattgacttcgtacttcgtaacttgatcgatcttaaatct
cgattacgcgcacttgatatccccttgcatactctcactatccatgagcgtcactctatt
cctgaccagattattcagatcttgaagacatggaacgcgtcccatcttactgctaatatc
gagcatgaagttgatgaacttagacgcgatatccaagttcttgaactagccaaaaaaaat
cagattcaagtaagattggtacatgatacatgtatagtcgaaccaggaaaagtgttgaca
aaagagaataaagcgtattcagtatttggaccatggcaacggaattgggcgaatttggtg
aacagtaatttagatgaatatattggaaaatcagaagattgtaaaccgaataacgcatgc
ataaaggatattaaaaccttgaatgatttattcgattcggaagtccctgcctctttacct
ggatttgaattaagtgaacaagattctctggtcatgaatgagaattggaaagcaggtgaa
aaagctgcagaagatttattgaataggtttttgaatactaaattggagcctgaaaagaaa
gagatccaaacgacgttaacaggaaaagcgagtcctcctaagaagaaagaagaatcgacg
atcgtacaagaatactctaccttaagaaaccgacctgatctaccaggtacaagtagatta
tcagcttatttagctgccggagttatttcgcctagagcttgtatcagagcttcaatgcag
atagctgagaaaggtaagaaagctgttaatggtcttcaagtcgatcgtcgtgatttaggt
gttggtgtttggcaatctgaaattggatggagagatttttaccaacatgttatggctgca
tggccaagagtaagtatgggcaaagcattcaaccaaaaatacgagaaaatggtctgggaa
tacgatgaacaaactttccagaaatggaaagatggtttaactggttatccgttcattgat
gcttgtatgagacaacttaaacatctcggttatatgcataatagaggcaggatgtgtgtg
gctatgttcctcactaaagatcttatgatggattggaggttaggtgaaaaatggtttatg
gaaaatttagtggatggtgatttaggtagcaataatggtggatggcaatggtcggcttct
accggtacagatccacaaccttatttcaggatctttgctcccctttctcaatccgaaaaa
tctgatcctgatggtgacttcatacgtcattgggtacctgaattaaaatcactcaatgca
aaacagattcatgccccttttgataaactttcaatcgaaaaattcaagtctttaaagtat
cctaaacctatagtcgatcattcagtggttagaaaacgcgctttggctcgatataaaaat
cctgggtgtgctgataatgaatga
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