Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_009768
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Entry
Pst134EA_009768 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03030
DNA replication
pstr03410
Base excision repair
pstr03420
Nucleotide excision repair
pstr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pst134EA_009768
03410 Base excision repair
Pst134EA_009768
03420 Nucleotide excision repair
Pst134EA_009768
03430 Mismatch repair
Pst134EA_009768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstr03032
]
Pst134EA_009768
03036 Chromosome and associated proteins [BR:
pstr03036
]
Pst134EA_009768
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_009768
DNA replication proteins [BR:
pstr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
Pst134EA_009768
DNA Replication Termination Factors
ELG1-RFC complex
Pst134EA_009768
Chromosome and associated proteins [BR:
pstr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
Pst134EA_009768
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
Pst134EA_009768
Check point factors
HRAD17(Rad24)-RFC complex
Pst134EA_009768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
AAA_14
AAA_16
nSTAND3
nSTAND_NTPase5
Viral_helicase1
RuvB_N
RCF1-5-like_lid
AAA_3
Mg_chelatase
AAA_assoc_2
AAA_19
AAA_5
Rad17
NTPase_1
MeaB
MipZ
AAA_24
AAA_11
ATPase_2
DeaD_dimer
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
72026050
NCBI-ProteinID:
XP_047808700
LinkDB
All DBs
Position
5:complement(3960113..3961707)
Genome browser
AA seq
332 aa
AA seq
DB search
MSLISSKANTSTADNLKASGAEVPWVEKYRPIVLDDITGNTDTIERLKVIARDGNCPHII
ISGSPGIGKTTSILCLAHALLGDAYKEGVLELNASDERGIDVVRNKIKTFANTKVTLPAG
RHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNNSSKIIEPIQSRCAILRYGKL
KDQEILKRLVEITVSEDLKYSEDGLAALIFTSEGDMRQAINNLQSTVSGFGFVSAESVFK
VCDQPHPIIIQKLLAACEQGDLDQALDQLQHLWVQGYSALDIVGTLLKVVKGMDRLSEFL
KLEFIKEIGFTHMRILEGVSTLVQVELYLRFF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcatcagctcgaaagccaacacttcgacagcggataacttgaaagccagtggg
gcagaagtaccctgggttgagaagtacagaccgatagtcttagatgatatcactggaaac
acagacactatcgaacgacttaaagtgattgcacgtgatggaaattgtcctcatattatc
atttcaggttctcctgggattggaaagactactagtatcctttgtttggctcatgctctc
ttaggcgatgcttataaggaaggagtcttggaattgaacgcgtcagatgaaagagggatt
gatgtagttcgaaacaagatcaaaacatttgccaacaccaaagtaacattaccagcagga
agacacaagataatcatcctcgatgaggccgattcgatgacagccggtgcccaacaagcg
ctgcgacgaacgatggagatatattcaaatacgactcggttcgcacttgcatgtaacaat
tcgagcaagatcatcgaaccgatccagagtagatgtgcgatcctacgctacgggaaactc
aaagaccaagagatcctgaaaagattagtcgagataacagtctccgaagacctgaagtat
tccgaggacggcttagcggcgttgatattcacatcagagggagacatgcgccaagccatc
aacaacttacaatctaccgtttccggattcggattcgtttccgcggagtcagtcttcaaa
gtctgtgatcaaccccaccctatcatcattcaaaaattactcgccgcttgtgaacaggga
gatctcgatcaagctttagatcaactccaacatctttgggtccaggggtactctgctcta
gatatcgttggcactttacttaaagtcgttaaaggtatggatcggttatccgaattcttg
aaacttgaattcattaaagaaatcgggttcactcatatgcgtattcttgaaggcgttagc
acacttgttcaagttgagttatatcttcgttttttctaa
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