Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_009864
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Entry
Pst134EA_009864 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Pst134EA_009864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_009864
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_009864
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Pst134EA_009864
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
Pst134EA_009864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Pcf11_C
zf_PCFS4
UBA_6
Motif
Other DBs
NCBI-GeneID:
72026146
NCBI-ProteinID:
XP_047808797
LinkDB
All DBs
Position
5:4442857..4446447
Genome browser
AA seq
791 aa
AA seq
DB search
MQGLPAPPPSIGYDVNEFRRFFKFGLDQLQYNNKYIINDLTTLASVHHHRMSTYIVKDIE
QHIRNSHPTHRLIGFYVLDSICKNLGHPFPQLFKPFIERLFLIAYRDIEDVDPLTKVKFE
ELLGTWRTGSANQTELFDPDIQRRIEESVFGNWRRDDSIASQAFLSGIKQQPAVATPAEK
ASILYDVRRILSEREQVAATYPGDQTNLAQMTTLQQLEQLIASQQLTINQVDDIRRQLQP
LKASILPPAPVEYGIPPSHLPAVVHQMDPLPTPHNPIEPFGDSDSLASLTRLLETNPNIL
LQAVNQSMAFPAHQEHSIQQHQTPLNFDDPNVQLAINHMAQLSQPPVAPSVPQLTQELAN
TNMFDSEQLAAALAYLNPTSQINSLLPELGSQELPIELIHQPSPAPSTLSTSESITTSQI
DPTILEYENMIAGLPIELQNSSINRVKPAEIADVLYSHIPQFCRQDGSRFLYGKVGSQRA
SEQLDRHFRLQRRVRESGQRAQQRMWSQLHSEWLDSHDFGSTGSGENSQVEANQRKKRKS
IEEDKSVNELSKKSIIRPSSPGLASQPCPICQEPFETRLDEDEDEFYWTNAIELTKEAGK
RVVYHATCHYETIRNKARMKIKFELEENRLKQKIQTEADLKTHGENGKVEQANGSGYPFT
HEVIEVGEASSRSSSNNDNQPVDSTSGGDDDDKCLLQVDESFFGETETVANDIKLESSDL
IPLVSSEPRLSNDPQVKSEPETIVLPPHRASSPLLGKRKPSPIVNLDPSSDLNDPLVVPH
SEVSSKKSKLS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtctgcctgctccaccaccctcgattggctacgatgtcaacgagtttcgaagg
ttcttcaaattcggtctcgaccaactccagtataacaataaatacatcatcaacgatctc
acaacccttgctagtgtccaccaccatcgcatgtcaacctacatagtaaaggatatcgaa
cagcacatccgaaacagccatcctactcacaggctaataggattttacgtcctggattca
atctgcaaaaatttgggccatccctttccacaattattcaagcccttcatcgaacgactg
tttttaattgcttatcgagatattgaggacgttgatccactcaccaaggtcaaattcgaa
gagctgctaggaacgtggagaactggatccgcaaaccaaaccgaactctttgatccggat
attcagaggcgaatagaagaaagcgtttttggtaactggcgacgtgatgattcaattgct
agtcaggcatttctcagtgggattaagcagcagccagcagttgcaacgccggcagaaaaa
gcaagcatattatacgatgtacgtaggattctatcggaacgcgaacaggtcgccgcaact
tacccaggcgaccaaaccaacctggctcaaatgaccactctccaacaactcgaacaatta
atcgctagtcaacaactgacaatcaatcaagtggacgacattcgcagacagctccagcct
ctcaaagcctctattctaccgcctgccccagttgagtatggtattccaccatcacacctg
ccggcagttgtacatcaaatggatcctttacctacccctcataatcctattgaacccttt
ggagactctgattcacttgctagtctaaccagacttctagaaaccaatcccaacatttta
ctacaggcggtcaatcagtcaatggcttttcctgctcatcaagagcactcaattcaacag
catcaaacacctctcaactttgatgatccaaacgttcagctggctatcaatcacatggcc
cagctttcacagccccctgttgccccttcagtccctcagcttacacaagaacttgcaaat
acaaacatgtttgacagtgaacaacttgctgccgcgcttgcctatctcaatccgacaagt
cagattaacagtttactacctgaactcggtagtcaagagctacctatcgagctcattcat
caacctagccccgccccctctacactcagtaccagcgagagtatcacaacttcacaaata
gatccaacaatacttgaatacgaaaatatgatcgccggattaccaatagaacttcaaaat
tcatccatcaatcgtgtcaaaccggcagagattgccgatgttctttactcacatattcct
cagttctgtcgacaagatggtagtcgatttttgtatggaaaagttggaagtcaacgagca
tcagaacaacttgaccgacactttcgattacaaagacgggtacgagagtctggacaacgc
gcacaacaacgaatgtggtcacaactacactcagaatggctagactctcacgattttgga
tcgactggaagtggggagaactctcaggtggaggcaaatcagaggaaaaagaggaaatcg
atagaagaagacaaatcggtaaacgaactttccaagaaatctatcattcgacccagttca
cctggtctagctagtcaaccatgtccgatctgtcaagagccattcgagactagactcgat
gaagatgaggatgaattttactggaccaacgcgatcgaactcaccaaagaggcaggcaag
cgggtagtgtatcatgcgacctgtcattacgagacgattcggaataaggcccgaatgaag
attaaatttgaactggaagagaaccgtctgaagcagaagattcaaacggaagccgatctc
aagactcacggtgagaatggaaaggtagagcaagctaatggatcaggatatccattcact
catgaagtcatagaggtgggtgaggctagtagtagaagtagtagtaataatgataatcaa
ccagtcgactccactagtggtggtgatgatgatgataaatgtttacttcaagttgatgaa
agcttttttggagaaactgagactgtagcaaatgatatcaaacttgagtcttctgacctg
attccccttgtctcctccgaaccccgactatctaatgatccacaagtaaaatcagaacct
gaaacaatcgtgctccctcctcatagggcttcttctcccttgcttggtaaacgaaaacct
tccccaatcgtcaatcttgatccttcatctgatcttaacgatcctcttgtcgttccacac
tctgaggtctcgagtaagaagtccaaactgagttga
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