Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_013037
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Entry
Pst134EA_013037 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03030
DNA replication
pstr03410
Base excision repair
pstr03420
Nucleotide excision repair
pstr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pst134EA_013037
03410 Base excision repair
Pst134EA_013037
03420 Nucleotide excision repair
Pst134EA_013037
03430 Mismatch repair
Pst134EA_013037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstr03032
]
Pst134EA_013037
03036 Chromosome and associated proteins [BR:
pstr03036
]
Pst134EA_013037
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_013037
DNA replication proteins [BR:
pstr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
Pst134EA_013037
DNA Replication Termination Factors
ELG1-RFC complex
Pst134EA_013037
Chromosome and associated proteins [BR:
pstr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
Pst134EA_013037
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
Pst134EA_013037
Check point factors
HRAD17(Rad24)-RFC complex
Pst134EA_013037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
AAA_11
RuvB_N
AAA_16
Mg_chelatase
AAA_14
AAA_assoc_2
AAA_5
Rad17
DEAD
AAA_28
AAA_24
SLFN-g3_helicase
AAA_2
AAA_7
AAA_19
ResIII
AAA_3
DUF815
RNA_helicase
MCM
AAA_30
nSTAND3
Motif
Other DBs
NCBI-GeneID:
72027245
NCBI-ProteinID:
XP_047805865
LinkDB
All DBs
Position
7:235571..237936
Genome browser
AA seq
382 aa
AA seq
DB search
MNAFDFMRAGAAAKKNAPTADPSSIQPPAALPWIEKYRPKSIESVQGQEGTTKILAKALN
RADLPHMLFYGPPGTGKTSTILALARDLFGPELMKTRVLELNASDERGISVVREKIKNFA
KISISPATSGYPCPAYKIIILDEADSMTQDAQSALRRIMENYSKITRFCLICNYVTRIIE
PIVSRCSKFRFKPLSVTGTRSKLAEISTLESIKISPEVLDSLISISAGDLRRSITFLQSA
SKLSDTNEILEHDIQEIGGIVPPKLMGRLLESTGIEVRNQAGAGGDEDVEMSDVDLKKGR
QKTSFEKVQDVAESVLREGYSAVQIINQLHDLILLDPLIPSKPKALISVALGEADKCLND
GADEGLQVLAVCLKISKAVSQS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattcgatttcatgcgtgccggcgctgccgccaagaagaatgcacctacagcc
gatccgagctcgatacagccaccagcagcgctgccttggattgagaagtacagaccgaag
tcaatagagagcgtccagggccaagagggtaccaccaagattcttgccaaagctctcaat
cgagcagatttacctcacatgctgttctatggcccacctggaaccgggaaaacttcaacc
atcttggctttggccagggatctatttggaccagagctcatgaagacgcgtgttttggaa
ctgaacgcatcggatgagcgtggaatctctgtagtcagagagaaaatcaagaattttgcc
aaaatttcaatcagtcctgccacatctggctatccatgtcctgcttacaagattatcatt
ttagatgaagctgattccatgacccaagacgctcaatccgccctgcggagaattatggaa
aactattccaagattactcgattctgtttgatttgtaattatgttacccgaattatagaa
ccgatcgtctcacgttgtagcaagttccgatttaagcctttatcagttactggaactcga
tcaaaattagctgaaatatcaacgctagagtcgatcaagatctctccggaagtacttgat
tcactgatttcaatttcagcaggcgatttgcggcgatcgattacatttttacaatctgcc
tcaaagctgtcggatactaatgagatacttgaacatgacattcaagagatcggggggatc
gtgccaccaaaactgatgggaaggttgctcgaatccactgggatcgaagttcgaaatcaa
gcgggcgctggtggtgatgaggacgttgaaatgtctgacgtcgatctaaaaaagggccgt
cagaaaacttcctttgagaaagtccaggatgtggctgagagcgtacttcgagaaggctac
agtgcagttcaaatcatcaatcagctgcatgatttgattcttctcgatcccctaatccct
tcaaaaccgaaagccctgatctcggttgcactgggggaggcagataaatgtttgaacgat
ggggctgatgaaggccttcaggtcttggcggtttgcttaaaaatctcaaaggctgtcagt
caatcatga
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