Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_013423
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Entry
Pst134EA_013423 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pst134EA_013423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_013423
Enzymes [BR:
pstr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pst134EA_013423
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
Pst134EA_013423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF7577
Motif
Other DBs
NCBI-GeneID:
72027631
NCBI-ProteinID:
XP_047806263
LinkDB
All DBs
Position
7:2271079..2277195
Genome browser
AA seq
1418 aa
AA seq
DB search
MKQIVLQEAPQKIKHIQFSVLSSQEIVAISEYESTQRDLYSMVGDGNGLNIPGAIEPLVK
KPAKGGVLDSRLGTSDKSGTCGTCNAKMADCVGHYSYIKLILPVFHIGYFRAVIQMLQDI
CKTCARVLLSEEDRRLYLIRFRRPNLENLQRQHLAKQVNTACRKVITCPYCGATNGTVKK
VGALRIIHEKFRAKKKADELASFRDTFITAIKETKELGPHLHKAQEDMNPLRVLNLFRRI
TPADCELLGLDPEVGRPEEYIWQYIHVPPVCIRPSVAQEAATNEDDLTVKLTEIIFTNTL
IKTGLVKGVPTQNIMEQWEFMQLSVAMYINAELPGVPSQMGVKPIKGFCQRLKGKTGRFR
GNLSGKRVDFSGRTVISPDPNLSITEVAVPDRVAKILTYPERVTPHNIDRLRQCVRNGPD
IHPGANYLVAGSTTNASGSAAPYKRSLRFGNRNNVANTLRLGDTVERHLHDGDVVLFNRQ
PSLHKLSIMSHRAKIRPWRTFRFNECVCTPYNADFDGDEMNLHVPQTEEARTEATELMNI
KYNLVTPRNGEPIIAATQDFITASFLLSRKDNFYDRQQFSQILQYLSDATLHIDLPPPVI
WKPVRLWTGKQVFNVLMRPNKDSPVKVNVEAKCATHQKAAPGYLPDMSPNDGWLVIQNSE
IMCGVVDKAIVGGGKKDSIFAVINCDFGPDEAVKAMNRLAKVSARWLANMGFSIGVGDVT
PGERLSTQKNALVAKAYKETDELIQQSKAGKLETLPGRDLDQTLEAMISGVLSKVRDSLG
EICMAELTRHNAPLIMATCGSKGSKINVAQMVACVGQQIISGNRIPDGFQDRSLPHFHKK
AKEPPAKGFVRNSFHSGLRATEFLFHAISGREGLVDTAVKTAETGYMQRRLMKALEDLAT
RYDDSVRNSVGGIVQFTYGDDGLDPTYLEGDGEPVEFARTWRHTKATVSHLDGRGLNPYE
ITQLVTDGLAKPRFTKACTQRFRDSVLDFMVEKVAKPAAHFRSSYGMYPALELEGDWDEY
TDLSAGVSDASKKIVANKTQVTLKQIETFLNHCWKKYVKAKVEPGTAVGAVGAQSIGEPG
TQMTLKTFHFAGVASMNITLGVPRIKEIINASKLINGPIINAPLVANHNERSARIVKARL
EKTYLGDVTSVIEEMYSNDSMYLGIHIDMETVQRLQLEITLDTIKWAIINAPKLKITSDQ
IQVIPRKNRIRVYVDTSLADGEKILPFYQKLMFLRRVLPGVVIKGLPKAGRTVINKNSNN
EYELLVEGYGLLDVMTTDGVVGTHTMPNHLMEAQTVLGIEAARNCIIKEISYTMDSHGLK
VDPRHMMLLGDIMCYKGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAALYSKRDAIE
GVSECIIMGNPANDIGTSAACLVSEVPRLPPRRKVLFY
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagatcgtcctgcaggaagcgcctcaaaaaataaagcatattcaattctcagtt
ttatcgtcacaagaaatcgtagcgatctcggaatatgaatccactcaacgtgatttatac
agcatggtgggagatggaaatgggctaaatattccaggcgcgatcgaaccgctcgttaag
aaaccggcaaaaggtggtgtcttggatagtagattaggtacatccgataaatccggaaca
tgtggaacctgcaacgccaaaatggcagactgcgttggacattactcttatattaaactg
atcctccccgtatttcatatcggttattttcgggctgttatccagatgttgcaagatatt
tgcaagacgtgtgctagggtgctattatcggaggaagatcgacgactatatctcatcagg
ttccgacgacccaatctagaaaatctacagcggcaacatctcgccaaacaagtcaatact
gcctgtcgtaaagttattacctgtccttactgtggtgctaccaatggtacagtcaagaaa
gttggtgctttgagaatcattcacgagaaattcagagcaaaaaagaaagccgacgaactc
gcctcattcagagacacattcattaccgccatcaaagaaactaaagaattgggacctcac
cttcacaaggctcaagaagatatgaacccacttcgagtcctgaatttatttcgaagaatt
actcctgcagattgtgaactccttggtttggatccagaagttggacgacctgaagaatac
atatggcagtacattcacgttccaccggtctgtatcagacccagtgttgcacaagaagcc
gcgacgaacgaagacgatttgacagtcaaactgacagaaatcatcttcaccaataccctg
atcaagactggactggtcaaaggagttcctactcaaaatataatggaacaatgggagttc
atgcagctttctgttgcaatgtatatcaacgctgagcttcccggggtcccttcccaaatg
ggagttaaaccgatcaaaggtttctgtcaaagactcaaaggaaagactggtcgatttcgt
gggaatttgtctggtaaacgtgttgatttttcaggacgaacggttatcagtccagatcca
aatctaagtattacggaggtggctgtcccagatcgggtagcgaagatattgacgtatcct
gaaagggtgactcctcacaatattgatcggttacgacaatgcgttcgaaatgggcctgat
atccacccgggtgccaactatctcgtcgcaggtagtacaacaaacgctagtgggagcgcg
gctccatacaagcgatctttgagatttgggaatcgaaacaatgtagcgaacactttacga
ttaggagacacagtggaaaggcatttacacgacggagatgttgtgcttttcaatcgacag
cccagtctgcataaactttccatcatgtctcatcgagctaagatacgaccttggcgaact
tttcgattcaacgagtgtgtttgcacgccctacaatgccgattttgacggagatgaaatg
aatttacatgtaccgcagactgaagaagctcgaacagaagctacagagctgatgaacatc
aaatacaatcttgttactcctcgaaatggggaaccgattattgctgccactcaagatttt
attaccgcctcctttctattatcccgaaaagataacttttacgatcgacagcaattcagt
caaatcctccaatatttatctgatgcaactctccacatagatctcccgccgccagtgata
tggaagccggttcgtttatggactggtaaacaagtcttcaacgtcctcatgagaccgaac
aaagattcacctgtcaaagtcaatgtcgaagctaaatgtgctacacatcaaaaagctgca
cccggatacttgccagatatgtcgcctaatgacggctggttggtcattcaaaattcagaa
attatgtgtggggttgtcgataaagctatcgttggtggtggaaaaaaggactctatcttt
gcggtcattaactgcgactttggacctgatgaagctgtcaaagccatgaacagacttgcc
aaagttagtgctcgatggctagcaaatatgggattttcgattggtgtcggcgatgtgacc
ccgggtgaaaggttgtctacccagaaaaatgcacttgttgctaaagcatataaggaaacg
gatgaacttattcaacaatcaaaagctggaaaattagaaaccctcccgggacgagacttg
gatcagacacttgaggcgatgatttcaggtgtcctttcaaaagtcagagatagtttggga
gagatttgtatggccgaacttacgagacataacgcacctttaatcatggccacttgtgga
tccaaaggttccaagattaacgtggcacagatggtagcttgtgttggacaacaaattatc
agtgggaatcgtattccggatggatttcaagaccgatctcttccccatttccacaagaaa
gctaaagaaccaccagccaaaggctttgtcagaaacagttttcactccggtcttcgagcc
actgagttcctctttcacgcaatttcaggtcgagaaggtctggttgatactgctgtcaag
accgctgaaacaggttacatgcagaggaggttgatgaaagctttagaagatctggccact
cgttatgatgactctgtccgaaattcggtcggtggaatcgttcaatttacttatggtgat
gatggcttggaccctacatacttggagggagatggagaacctgtggaatttgctcgtact
tggaggcacacaaaagccacagtatcacacctcgacggaagaggactcaacccatacgaa
atcacccaattagtaaccgatggtctggcgaaacctcgattcactaaagcttgtacacaa
cgtttcagagactcggttttggatttcatggttgaaaaggtagccaagccagcggcccat
ttcagatcaagctatggaatgtatcctgctttggagctagaaggagattgggacgaatac
accgatttgtctgcgggcgttagcgatgccagtaaaaaaatcgtggctaataagactcaa
gtcaccctgaaacaaattgagacattcctgaaccattgctggaaaaaatacgttaaagct
aaggtcgaaccgggtactgccgtcggtgcagttggtgcccaatcaattggtgaacccgga
actcaaatgaccttgaagactttccattttgccggtgtagcctcgatgaacattacgctt
ggtgtaccacgaatcaaagagattatcaacgcttccaaactcattaatggacctatcatc
aacgcccctctagtcgccaatcacaacgaaaggtctgccagaatcgtgaaggctcgattg
gaaaaaacttacttgggtgatgtcacatctgttatcgaagaaatgtactccaacgattca
atgtatcttggtatccacattgacatggaaactgttcaacgcctgcagttggaaattact
ctagatacaattaaatgggctatcatcaacgcgcccaagcttaaaatcacgtctgaccaa
atacaagtaattccaaggaagaatcgaatcagagtttatgtggatactagcttagcagac
ggcgaaaaaatcctaccgttctatcaaaagttgatgttcctacgtcgagtccttccaggg
gttgtgatcaaaggtcttcctaaagctggccgaacagtcatcaacaaaaatagtaacaat
gagtacgagcttctcgtcgaggggtatggtctacttgatgtgatgaccacagatggtgtg
gtcggtacacataccatgcccaatcatctcatggaagcacaaactgtattagggatcgaa
gcagctcgaaattgtatcatcaaggaaatctcatacacgatggactctcacggattgaaa
gtagaccctagacacatgatgttattaggagatatcatgtgttataagggtgaagtcctt
ggaatcaccagatttggtatcgccaagatgaaggattcagtactcatgttagcttcgttt
gaaaaaacgaccgatcatcttttcgacgcagctttatatagtaaaagggacgctatcgaa
ggagtatctgaatgtatcatcatgggtaatcctgctaatgatatcggtacttccgcggct
tgtttggtctccgaagtacctagactaccacccagacgaaaagtcttgttttattag
DBGET
integrated database retrieval system
