Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_013707
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Entry
Pst134EA_013707 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Pst134EA_013707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pstr03041
]
Pst134EA_013707
Spliceosome [BR:
pstr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
Pst134EA_013707
Complex C
U4/U6.U5 tri-SnRNP related factors
Pst134EA_013707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
72027915
NCBI-ProteinID:
XP_047806563
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All DBs
Position
7:complement(3709894..3711628)
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AA seq
279 aa
AA seq
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MANTTAKGAVSIHGTNPQFLIDKVLRSRIYDSEYWKESCFGLTAETIIDKTVFDLNYLGS
TFTANLRPTPFICLLLKLLQLQPEKEIILEYLRAEEFKYLRALAAFYVRLTFTSINVYQT
LEPLLQDYRKLRVRGLDGTYDLTTFDELIDNLLTESIVFEIVLPRLTSRKVLEDLESLPE
RKSTLGIALGFHSDDSEQEQDQEEGEDRASPTSDHNSNRFVSRSPTPTKTDQDTDNPDQP
HHSPTARSQSDRFISRSPSLDRFVSRSPTPEPERVEGDL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacacaaccgcaaagggggcagtctcgatacacggtaccaatccacaattctta
atcgacaaagtacttcgatcaagaatatatgattcagaatattggaaagaatcttgcttt
ggattaactgctgaaacgataatcgataaaactgtcttcgatttaaattacttgggctct
acttttacggctaacctcagacctacgcccttcatctgcttattacttaaacttttacaa
cttcaacctgagaaagaaatcattctagagtatttacgcgctgaagaattcaaatactta
cgagcattagcagcattttatgttagactaacatttacatcaattaatgtatatcagaca
ttagaaccattattacaagattatagaaaattaagagtaagaggattagatggaacttat
gatttaactacatttgatgagttgattgataatctattaactgaatcgatcgtatttgag
atcgttttaccacgattaacttcgaggaaagtcttggaagatctggaatcactacccgaa
cgtaaatctactcttggaatagcacttggatttcattctgatgattcagaacaagaacaa
gatcaagaagaaggagaagatcgagctagtccgacaagtgatcataatagtaatcgattc
gtgtctcgttcacctacaccgacgaagaccgatcaagatacagataaccctgaccagcct
catcattctccgactgcccgttctcaaagtgatcgattcatctctagatctccttcacta
gacagattcgttagtcgtagtccaactcctgagcctgaaagggtcgaaggagatctgtaa
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