Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_013759
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Entry
Pst134EA_013759 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Pst134EA_013759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pstr03041
]
Pst134EA_013759
03009 Ribosome biogenesis [BR:
pstr03009
]
Pst134EA_013759
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Pst134EA_013759
Spliceosome [BR:
pstr03041
]
Complex A
U2 snRNP components
U2 related factors
Pst134EA_013759
Complex B
Pst134EA_013759
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
Pst134EA_013759
Ribosome biogenesis [BR:
pstr03009
]
Eukaryotic type
90S particles
Helicases
Pst134EA_013759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_19
AAA_22
SRP54
Flavi_DEAD
nSTAND3
Motif
Other DBs
NCBI-GeneID:
72027967
NCBI-ProteinID:
XP_047806619
LinkDB
All DBs
Position
7:3981759..3984933
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AA seq
686 aa
AA seq
DB search
MPEFYRMYNKSQFMVLQGETGSGKTTQVPQYAVYGDLLHMKNKQIACTQPRRVAAMSVAK
RVADEMDVKLGEEVGYSIRFEDCTSSKTILKYMTDDMLLREALHDNTFSLYSTLILDEAH
ERTLATDILMGLLKDAAKRRPDLKIIVMSATLDATKFQNYFNSAPLLKVPGRTFPVETSY
TSEPVPDYLEAAISTVLKIHIDEQPGDILVFLTSQEEIEDAWRKIRMEVDQLFQTSSLVG
PLECVPLYSSLPPQQQQRIFDPPPPPLTPSGPPGRKVVISTNIAETSLTIDGIVYVIDPG
FSKQNVYNPRIRVECLQVFPISKASAQQRAGRAGRTRPGKCFRLYTEDSFVNELEDRAYP
EILRSNLANVVLQLKKLGVDDLVHFDYMDPPAPETVIRALELLNYLAAFDEDGNLTPLGE
MMTGFPLDPQLSKILISSPEFKCSNEILSIAAMLSVPNPFLRPHDQRKEADDAKAQFTHP
EGDHLTLLNLFQAYKSSSDPHNWCCQNYVANRAMLQAVNVRNQLKKIMEAFDLDVISIDY
KHQDYSKNIRMAITTGYFMHVAHKEREKGVYATRDGQMVELHPSSGINDSPEWVLYNEFV
LTTRNFIRMCAEVKAEWLLDVAPLYYDVKTMPHGEARRALQRIVAKKPNQSSKMIGNSQN
SQSKARNRQRKLNKSSKASSGTTTTT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattttatcgcatgtataataagagccaatttatggtattgcaaggtgaaact
ggatcaggaaaaactactcaagtaccacaatatgcggtttatggagatctgctacacatg
aaaaacaaacagattgcttgtactcaacctagacgcgtagcagctatgagtgttgccaaa
cgtgtggctgatgaaatggacgttaaacttggagaggaagttggttacagcattcgattt
gaagattgtactagttcgaagactatcctgaagtacatgactgatgatatgttgctaaga
gaggcactacatgataacacattttcgctttattcgactttaatcttagacgaagctcac
gaacgtacacttgcaaccgatatcttgatgggactattaaaagatgcagcaaaacgaaga
ccagatttgaagataattgtaatgtcagcaacactagatgccactaaatttcaaaattat
tttaattcagcaccattattgaaagtaccgggaagaacatttccagtcgaaacgtcttat
acatcagaacctgtaccagattatctagaagcagctatcagtacggtactaaagatacat
atagatgaacaacctggtgatatcttagtgtttcttactagtcaagaagagatcgaagat
gcttggagaaagattcgtatggaagtcgatcaactcttccaaacttcttctctggttggt
ccactggaatgtgtgccactatactcatctctacctcctcaacaacaacaaagaattttt
gatcctcctccaccaccccttactcccagtggaccacccggtaggaaagtggtaatctct
actaacatagctgaaacctcattaacgatcgatgggattgtttatgtgatcgatcctgga
ttctctaaacaaaatgtttataatccaaggatcagagtagaatgtttacaagtatttcct
atctctaaagcttctgcacagcaaagggctggtcgggcagggcgaactagacctggaaaa
tgtttcagattatacactgaagatagctttgtcaatgaattagaagatcgtgcttacccg
gaaattttaagatcaaacttagcaaatgtagtcttacagttaaagaaattaggagtcgat
gatctagtacatttcgattatatggatccacctgcacccgaaacagttattagagcctta
gaattattgaactacttagccgcttttgatgaagatggtaatcttactcccctaggtgaa
atgatgactggatttccactagatcctcaactctctaaaatactaatctcgagtcctgaa
tttaaatgtagtaatgaaatcctaagtatcgctgctatgttatctgtgcccaatcctttt
ctgcggcctcacgatcagcgtaaggaagccgatgatgccaaggctcaattcactcatcca
gagggagatcatctaacgcttttaaacttattccaggcatacaaaagtagctcagatccg
cacaattggtgttgccaaaattacgtagcaaatcgagcgatgttacaagccgtcaatgta
cgaaatcaattgaagaaaataatggaagcgtttgatttggatgtgatttcgatcgattat
aaacatcaagattattctaagaatattagaatggctatcactactggttattttatgcat
gttgcacataaggaacgtgaaaagggtgtctatgctactagggatggccaaatggttgaa
ttacatcctagctctggcatcaatgatagtcccgaatgggtgctctataatgagttcgtc
ttaaccacacgaaattttattaggatgtgtgcggaagtcaaagcggaatggttattagat
gtcgccccattgtattacgacgtgaagacgatgccacatggtgaagctagaagagcactc
cagagaatcgtcgctaaaaaacctaatcagtcttctaagatgatcggtaattctcagaat
tcgcaatcgaaagcgagaaaccgtcaacgaaaattgaacaaaagctctaaagcttcttct
ggtactactaccacaacttga
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