Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_013760
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Entry
Pst134EA_013760 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Pst134EA_013760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_013760
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Pst134EA_013760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
DUF1195
Motif
Other DBs
NCBI-GeneID:
72027968
NCBI-ProteinID:
XP_047806622
LinkDB
All DBs
Position
7:complement(3986070..3989505)
Genome browser
AA seq
682 aa
AA seq
DB search
MGSRTKLDQALQSNKHDYTRLYQVILRRRTYHFCTISYLLSNFVLWFVMLDGLPALWNGL
RITTWIMAGANWASATIPLMTLRRLQLTAPSLYAPNRYAKFWAVLKSTEFITSTIFCSIS
GSLLCFTYVSAALALNENPDLGLLKSIPGRGVTQINERPIFLLASCLYTALCYSFSAIYH
GQWHYRPLDVSEHLTIPQRIWKAFSSRIELVRRSIIYCSATFLPIYLISRRYLIRAIIFS
KYTQLTKHIKPHMVMLIKFDSIFTLTSIIRLVMINVMLLSMWEIVQALWDVYSSHPLDLS
RFDTEPNQCLLEGIRSTDPRVKHFAIRELAHISWSDPARRSTIFKDIRTSPRLLNLVIEE
CLGVIDNTKAMIESGDGLNDKTPVSTTQISIGARKPSPGSHSALKTDLPQIFNSSSNPNS
MKQVLLKKLLSSESDQGNTPPSSTPSQLATPTKQTTESDYQIPDIFKRSQSQKLADKSTS
GLSIEDTSKPSPSSPSPAQAKPSSTPAKRETIVPKIWQILLHSPLLKSSNAGPRLESWLF
SPSITDELEKHLSNRQLCMFSVEAVTNFTCASLTEDQYGVLQDQIPRIMESLVDCFDALD
QFRVNICAEFGVQTSSIQDRSSATTEVNPVQIGFHLALDEHLHPLLTRLKAGIFGITDQF
KPFLQEISFSPKINQWIKSHPR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcggactaaactcgatcaggcacttcagtccaacaagcatgactacactcga
ctctatcaggtcatccttcgcaggcgaacatatcacttttgcacgatcagttatcttctg
agcaacttcgtgctatggtttgttatgttagatggtttacccgcgttgtggaatgggctt
cgtatcactacgtggatcatggccggagctaattgggcaagtgcaacaatcccattgatg
acgttgaggagattacaacttacagctcccagtttatacgctcccaatcgatacgcgaaa
ttttgggcggtattgaagtccacggaattcatcacttcaacaatcttctgctcgatcagc
ggttctctactttgcttcacttacgtgtccgccgccttggctttgaatgaaaaccccgac
ttaggccttctgaaaagtataccaggacgaggagtcactcagatcaacgagcgacccatt
tttctcttggcatcctgtttgtacactgcgctatgttattcattctctgctatatatcat
ggtcaatggcattaccgtcctttagacgtgtccgagcatcttacgatcccccagaggata
tggaaggcgttcagctcgcgaattgaattggttcgaagatcgatcatatattgttcggcc
acgtttctgccgatctacctgatttcacggaggtacctgattagggcgatcatattttca
aaatacacccaattgacgaaacacatcaagcctcatatggtcatgctcatcaagtttgac
tcgatcttcaccttgacgtctatcatcagactggtgatgattaatgtgatgttgttatcc
atgtgggaaatcgtacaagcgctctgggacgtctattccagtcatccactcgatctgtct
cgctttgacaccgaacccaatcaatgcttattagaaggaattcggtcaactgatcctcgc
gtcaaacatttcgctatacgagagctcgctcacatatcgtggagtgatccggcccgccga
tctacgattttcaaggatatcaggacatctcccaggttgttgaatctggtgattgaggaa
tgcctgggtgttattgacaacacaaaagcgatgatcgaatctggagatggcctaaacgat
aaaacaccagtttcgacaacccaaatttcaataggagctcgcaaaccttcacccggttct
cattcagccttgaagacggatttgccacaaattttcaattcgagctccaatccgaattca
atgaaacaggtcctcttgaaaaagctcctttcaagtgaaagtgaccaaggaaacacaccg
cctagttctactccatctcagctggcaacgccgacaaagcagaccactgagtccgattat
caaatcccagatatcttcaaacggagccagagtcaaaaacttgccgataagtcaacctct
ggtctttccatcgaagatacttcgaaaccttcaccatcatcaccatctcccgctcaagcc
aaaccgagctctactcctgcaaagcgagaaacaatcgtaccgaaaatctggcagatcttg
ctacatagtccactcctgaagtcttcaaatgctggcccccgattagagagctggttattt
tcaccttcgataacagatgagctcgagaagcatctgtcaaatcgtcaactgtgcatgttc
tccgtcgaggccgttacgaacttcacttgcgcttcattaacagaagatcaatacggagtg
ttacaggatcaaatcccacggatcatggaaagtttggttgattgctttgatgcacttgac
caattcagggttaatatttgtgctgaattcggagtccaaacctcttcgattcaagacaga
tcatcggctacaaccgaggtgaatcctgtacagatcggctttcatttggctttggatgaa
catcttcatcccttgttaacacgtctgaaagcgggaatttttggtatcaccgatcagttc
aaacctttcttacaagaaatctcattctcacctaagattaatcaatggatcaaatctcat
cctcgttaa
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