Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_013816
Help
Entry
Pst134EA_013816 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03082
ATP-dependent chromatin remodeling
pstr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Pst134EA_013816
03083 Polycomb repressive complex
Pst134EA_013816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pstr03036
]
Pst134EA_013816
Enzymes [BR:
pstr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
Pst134EA_013816
Chromosome and associated proteins [BR:
pstr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
Pst134EA_013816
HDAC complexes
Sin3A-HDAC complex
Pst134EA_013816
BRAF-HDAC complex
Pst134EA_013816
REST complex
Pst134EA_013816
SHIP complex
Pst134EA_013816
MiDAC complex
Pst134EA_013816
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
Pst134EA_013816
Heterochromatin formation proteins
Other heterochromatin formation proteins
Pst134EA_013816
Chromatin remodeling factors
NuRD complex
Pst134EA_013816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
72028024
NCBI-ProteinID:
XP_047806683
LinkDB
All DBs
Position
7:complement(4240303..4243765)
Genome browser
AA seq
690 aa
AA seq
DB search
MSGNMIPIAGENKKRICYFFDSDIGNYHYGPGHPMKPHRIRMTHALVMNYGLYKKMEIFR
AKPATRKEMAQFHTDDYVDFLSKVTPDNMEEFSKEQTKFNLGDDCPVFDGLFEYCSISAG
GSMEGAARLSRDKCDIAVNWAGGLHHAKKAEANGFCYVNDIVLGILELLRYHKRVLYVDI
DVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDTGHGKGKHYAVNFPLRDGITDE
AYKNIFEPVIMKIMETYQPSAIVLQCGGDSLSGDRLGSFNVSMRGHANCVQFIKSLGLPL
LLLGGGGYTIRNVSRTWAYETGLAAGQELCPDIPMNEYYEYFGPTYRLDVPPSNMEDMNV
VKYLEKTKIQIFENLRHTIPVPSVGLQAIPRMLHDEMDVDDDLDDPNERKPQRLLEGLIQ
RDDEFSDSEDEGEGGRRDVQSHKRARRQSPKLNGNGILNIHSGIQNGISQSQHHNGMDFN
RITSSHHSPISVDPIEPPPLVAPAPIPPLVDIPMLSQVDQMELEKLTSEALASMEPIQIQ
NVQQQLSQPPQIVLEEQPTLPTQSSDSNPTLQTTTIQETSKPTPTPIIEQSSQLIQTNIS
EPSQTIPQPDVVNPSPPHQPNLEDPFVLLKARLDELSSSVSASAAATATATGTGTATATV
GDQPAPTTSASDHLELGTTFDNTSLNPNPS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaacatgataccgattgcaggcgaaaataagaaaagaatttgttattttttc
gattcagatatcggaaactatcattatggacctggccatcccatgaaacctcatcggatt
cgtatgacacacgccctggtgatgaactatggactatacaagaaaatggagatttttagg
gccaaacctgcaactcgaaaggaaatggctcaatttcatacagacgattacgtggatttc
ttgagcaaagtgacccctgataatatggaagaattctcgaaggaacaaactaaattcaac
ctgggcgatgactgtccggtattcgacggtttatttgaatattgctcaatctctgctggt
ggctcgatggagggagctgccaggttatcaagagacaaatgtgacattgcggtcaactgg
gcaggtggtctccatcatgccaaaaaagcagaagctaacgggttctgttatgtcaatgat
atcgtcttggggatcctcgagcttcttcggtatcacaagcgcgtactctatgttgacatt
gacgtccaccacggtgacggggttgaagaagctttttatacgactgaccgggtgatgaca
tgtagtttccacaaatacggcgaattcttccctggtacaggtgaactacgtgatactggc
catggcaagggcaaacactatgctgttaatttccctctgagagatggcatcaccgatgag
gcgtacaaaaacatatttgaaccagtcattatgaagattatggagacatatcaaccttca
gctatcgtacttcaatgcggaggggattcattatcaggagaccgcttaggaagcttcaat
gtctcgatgcgaggacatgcaaactgtgtgcaatttatcaaatccctagggttgccttta
cttcttcttggtggagggggatacacaattcgaaacgtatctaggacatgggcgtacgaa
actggactggcagcgggacaagaactttgtccagatattccaatgaatgaatattacgag
tattttggtccgacttatcggttagatgtgccaccctctaatatggaagatatgaacgtt
gtcaagtatttggaaaagaccaagattcagatctttgaaaatttgcgacatacgatcccc
gttccatcagttggtcttcaagctatccccaggatgttacacgacgagatggatgtggat
gatgatctggatgatcctaatgagcgcaaacctcagcgactcctggagggattaatccaa
cgggacgatgagttttcagatagtgaagatgagggggaaggtgggagaagagatgtccaa
tcacacaaaagggcacgacgacaatcgcccaagctgaatggaaatgggattctaaatata
cactctggcatccagaatgggatatctcaatctcaacatcacaatgggatggactttaac
cgaatcacttcaagtcaccattctccaatttcggtagatccgattgagccaccgcctctt
gtggcaccagccccaataccacctctagttgatataccgatgctatctcaagtcgaccag
atggaactcgaaaaacttacgtctgaagctttggcaagtatggaacctatccaaatccaa
aacgttcaacaacagctctctcaaccacctcaaattgtactcgaagaacaaccaactcta
cccactcaatcatctgattctaatccaacccttcaaacaacaactatccaagaaacttct
aaacctactccaacgccaataattgagcaatcatctcagctcatccaaaccaatatctca
gaaccatctcaaaccattcctcaacctgatgttgtaaatccatctccacctcatcaacca
aatcttgaagatcctttcgtactgctcaaagcacgtcttgatgaattaagttcatctgtc
tccgcatctgctgctgctactgcaactgcaactggcactggtactgctaccgccactgtg
ggtgatcagcctgctccaaccacttcagcttctgaccatcttgaacttggcacaacgttt
gacaatacaagcctaaatccaaatccatcttag
DBGET
integrated database retrieval system
