Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_013922
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Entry
Pst134EA_013922 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K06634
cyclin H
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03022
Basal transcription factors
pstr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pst134EA_013922
09124 Replication and repair
03420 Nucleotide excision repair
Pst134EA_013922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_013922
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_013922
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Pst134EA_013922
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Pst134EA_013922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
72028130
NCBI-ProteinID:
XP_047806796
LinkDB
All DBs
Position
7:4702407..4704454
Genome browser
AA seq
353 aa
AA seq
DB search
MNVKNQTKEQATVRQPLYELSTQFRHWRFSQSGLELARRELNEGAVGRVKSKLEEERNVE
IPSTEPGTGMIEEPSQIEYLTVQDELELVTFYLSKISQLCRASIFNFPETVEATAMSYLK
RFYLRNTCMDYHPKNIMLTCLFLATKTENTSISIDSFASRIPKTTNEDVLALEFLVAQSL
KFQFKVHHSHLAARGIYLDLQTCPSLQGQAGINQLTQAWPEVCGLLRAGRLTDLEFLWTP
SQIACAAWWIVDKPIIEIWLKLKSDRLLTTPPLTLNPLINHLNSISQNLNNAKFKPIDKD
RVTAVDRRLRFCRNPEKDPNSNLFKIRKAQIENDSIVKHHQKYPVGANHDPFS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaagaaccaaacaaaagaacaagcaacagtacgacaacccttgtatgaacta
tcaacacagttccgtcattggaggttctctcagtctggactcgaactggctaggagggaa
cttaatgaaggtgctgttggtagagtgaaatctaagctagaggaagagaggaatgttgaa
attccttcaaccgaacctggaactggaatgattgaagaacctagtcaaatcgaatatctt
actgtccaagatgaattagaattagtcacgttttatttatctaaaatttctcaattgtgt
agggcttcaatcttcaactttcctgagaccgttgaagctactgctatgtcttatcttaaa
cgattttaccttaggaatacttgtatggattatcatcctaaaaatatcatgcttacatgt
ttattcttagccacaaagacggaaaacacatccatatcaattgatagttttgcttcacga
atcccaaaaacaacaaatgaggatgtattagcgctagaattcctggtagcccaatcattg
aagttccaattcaaagtacaccattcccatctggctgcccgaggaatttacctggactta
cagacgtgtccatcgctccaaggacaggctggaatcaatcagctcactcaagcttggcct
gaagtttgtggattactgagggctggtcgattaacggacctggaattcctttggactcct
agtcaaatcgcttgtgctgcatggtggatagtagataaaccaatcatcgaaatctggcta
aagctgaaatcagatagacttcttaccactcctcctctcactcttaatcctctaatcaac
catcttaattcaatatctcaaaatcttaacaacgctaaatttaaaccaattgataaagat
agagttacagctgttgatcggagactaaggttttgtagaaatccggaaaaagatccaaat
agtaatctattcaaaattagaaaagctcaaattgaaaacgattccatcgttaaacatcat
cagaagtatcctgttggagctaatcatgatccgttttcttga
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