Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_013934
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Entry
Pst134EA_013934 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03030
DNA replication
pstr03410
Base excision repair
pstr03420
Nucleotide excision repair
pstr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pst134EA_013934
03410 Base excision repair
Pst134EA_013934
03420 Nucleotide excision repair
Pst134EA_013934
03430 Mismatch repair
Pst134EA_013934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstr03032
]
Pst134EA_013934
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_013934
DNA replication proteins [BR:
pstr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
Pst134EA_013934
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
Pst134EA_013934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_14
AAA_16
AAA_22
AAA_33
RuvB_N
AAA_28
AAA_18
RCF1-5-like_lid
nSTAND_NTPase5
AAA_30
NTPase_1
BRCT_2
DUF5906
Colicin_Pyocin
AAA_5
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
72028142
NCBI-ProteinID:
XP_047806809
LinkDB
All DBs
Position
7:complement(<4803179..>4806560)
Genome browser
AA seq
776 aa
AA seq
DB search
MAKRTTTEKPASSKAPATKKQKTDAEAGSSTTPAKPKWFPGKERAGPSAPGSKPIPEGKE
NCLAGLTFVFTGELESLSREDAQSLCKRYGGRVTTSPSSKTSYVVLGSDAGPKKLEMIKK
HKIKTITEDEFLALIGSNASGEVDAKTIKKQEEEVKKVEQVAKSLGPAKGSVSETKSSGQ
LWTVKYAPKTLGDLCGNKTQIDKIQAWLHDWPKFRRAKFTKPGKDGLGMYRCVVLSGPPG
VGKTSAAHLVAQTEGYEVIELNASDTRSKKLLETGFKDITSTQRSEKLVLIMDEVDGMSA
GDRGGVGALNALIRKSQIPIIAIANDMSTPKMKPLKATALSLVFRRPNVNMIRSRMMSIA
FKEGMKIPPNVIDQLVEGSQSDIRQIINMLSTWKIGNSQQGPSKTMDFDQARQMTSENEK
DAIMSPWTLMSKIFAPQTWSQMSSLSFIDKCNLYFHDHSMLPLFVQDGYVKHDYGLARNC
AGQEKAAKKMELLSLAADSIADGDLVDRMIHGPQQHWSLMPLHGVFSVVRPAYFCHGPST
TSDFGGFSFPSWFGKNSTQGKLSRVMGEIHGRMRMKISGDKRETLMTYLPVLYPKLIDPL
IRDGTGENVDQIIELMDDYYLTKEEWDNLVEVMAIGKSHEDLLKQIPSATKSAFTRKYNK
GTHPIPFQKEVLGAAVSKKIKSDVIPDVEEIAEIDVEEEGDEDEKSDEESTDIAKDKLIK
AKKPTRASGAAARATTKAAQASSSTSKPKPKPKSKSEPKAKPAPKSTASKARKSTK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaacgacgaccgagaaaccagccagctcgaaagcacctgcaaccaaaaaa
cagaaaacagacgccgaagctggctcatcgacaacaccagccaagccgaaatggttcccc
ggcaaggaacgcgctggtccatctgcaccaggatccaagccgattcctgaaggtaaagag
aactgtctagctggattgacattcgtttttactggtgagttggagtccctcagtcgagaa
gatgcacagtcgctctgcaagagatacggaggtcgagtaactaccagcccctcttcaaag
actagctacgtcgttcttggatccgacgcaggacccaaaaagttggagatgatcaaaaaa
cataagatcaaaacaattactgaggacgaatttctggctctgattggctctaacgcttct
ggggaagtagacgccaagaccataaagaaacaggaggaagaagtcaaaaaagtcgaacaa
gtagccaaatcacttggtccagcgaagggaagtgtcagtgaaacaaagtcatcgggtcag
ttgtggacggtcaagtacgcacccaaaactctaggggatctgtgtggaaataaaacccag
atcgataaaattcaagcctggcttcatgattggcctaagttcagacgcgcgaaatttacg
aaacccggtaaagatggcctaggaatgtatagatgcgtcgttttatccggtccgccaggt
gtcggcaagacatcggccgcgcacttagttgctcaaactgagggatacgaagtgattgag
ttgaatgctagtgatacgcgtagtaagaagcttttggagactggattcaaggatatcacc
tctactcaacgatcggagaaattagtattgattatggatgaggtagatggaatgtcagct
ggtgatcgagggggagtgggagccttgaacgcattgatcagaaaatcacaaatcccaatc
attgcgattgcgaatgacatgtcgacaccgaagatgaaacccttaaaggctactgcactt
tcgctcgtctttcggagacctaatgttaacatgattcggagtagaatgatgagtatcgca
ttcaaggaaggcatgaaaatccctcctaatgttatcgatcaactcgtcgaaggaagtcaa
tctgatatccgccaaatcatcaatatgctatctacttggaaaatcggtaacagtcaacaa
ggtccttcaaaaactatggacttcgatcaagcacgccaaatgacttccgaaaatgagaag
gacgctataatgtccccatggaccttgatgagcaaaatttttgcgcctcaaacttggagt
caaatgagttcattgtcattcattgacaagtgtaatctatacttccacgatcacagcatg
ttgccgctatttgtgcaggatggttacgtaaaacatgattacggactagcaaggaactgt
gctgggcaggagaaggccgctaagaaaatggagctgctttcgctggctgctgattcgatt
gctgatggggatttagttgatcgaatgattcacggcccgcagcaacattggagtctgatg
cccctccatggggtgttttcggtggtcaggccggcatacttttgtcatggtccgtccact
acgagtgattttggaggtttttcgtttccgtcatggtttggtaagaattcgacacaaggt
aaactgagtcgagtgatgggggagattcacggtcgaatgcgaatgaagatctctggtgat
aagagagagactttaatgacttatctcccagtcttatatccaaaattaatcgacccactc
atccgggatggtactggggagaacgtagatcaaattattgaactcatggacgactattat
ctcactaaagaggagtgggataacttggtggaagtcatggctatcggtaaatcacatgaa
gacttattgaagcagatcccatcagcaaccaaatcagcatttacccggaaatacaataaa
ggtacacatccaatacctttccaaaaggaagtccttggggccgccgtgtctaagaagatc
aagtcagacgtcattcctgatgtagaagaaatagctgagattgatgtggaagaagaagga
gatgaggatgagaaatcggatgaagagtcaacagatattgctaaagataagttgatcaaa
gccaagaaacctacacgagcatctggagccgcagctagagccacaacaaaagctgcacaa
gcatcttcttcgacttctaaacctaaaccgaaaccaaaatctaagtctgaacccaaagcc
aagccggcacccaaaagtactgcatcaaaggcccgaaaatctaccaagtaa
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