Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_015118
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Entry
Pst134EA_015118 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03022
Basal transcription factors
pstr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pst134EA_015118
09124 Replication and repair
03420 Nucleotide excision repair
Pst134EA_015118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_015118
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_015118
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Pst134EA_015118
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Pst134EA_015118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
72028368
NCBI-ProteinID:
XP_047804866
LinkDB
All DBs
Position
8:complement(923571..924928)
Genome browser
AA seq
78 aa
AA seq
DB search
MVKAHKGVLVTCDPAAKQLILKLNDQPSHQISEFGLVTPFIIQDLDETHLLVTQECVNVL
RRQLEAELEKNTFTLDSI
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaagcccacaagggagtcttggttacgtgtgatccagcagccaagcaattaatt
ttgaagctaaacgaccaaccaagtcatcaaatttctgaatttggtttagtcacaccattc
atcattcaggatttagatgaaactcatttgctggtcacacaggagtgtgtgaacgtactc
aggagacagttggaagctgagttggaaaagaatacatttacgcttgatagtatctag
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