Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_015710
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Entry
Pst134EA_015710 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pst134EA_015710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_015710
Enzymes [BR:
pstr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pst134EA_015710
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
Pst134EA_015710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
YhfH
Motif
Other DBs
NCBI-GeneID:
72028957
NCBI-ProteinID:
XP_047805461
LinkDB
All DBs
Position
8:4035302..4041657
Genome browser
AA seq
1810 aa
AA seq
DB search
MDPAHPLLTNITSVSFSPLLSSDVRSISVLQITNPSLLDNNNVPSTAGLYDPRLGPIDWK
DICWTCHQLNTQCPGHFGHIELNVPVFHPLFMTHAYHLLRATCFYCHHFLCTELIILRFT
AKLKLLEHGLPLESDAIDDFPTSQPINAGKRGAEEGPDQENEDAEADQASFDIAFYKKSI
SKFVSDCLNREEKPVMARCSGEDYKIGMCFDRRRQVISELFKLLPKKKCERCGAFSSRMR
KDGHTKIMEYSLVAKQEKFHKLTGKVRPNVLKFSTGSSLSRRSASVQPSNQTSKRQRTDP
SSAHGQSFSDVNSDDGASAWAQNSQPARSNFGDDASDSDVAEVAPKRKVVSIRSETESDE
NSNDDDDDDDDGDDDLIKQDTAGKTTKQTERMMMAQEARAHLHQLFINEPEICGLLYGSR
YPAVHSDRQQAPASADMFFLEVVPVPPSRFRPAAMMGGMTLESPQNQLLTQILTQTIKLR
DFNSELETTSRRLKLEKHLNATEIAALQTTRAKLYRQVLEACVGMQIVVNSLMDSTKNPT
SMGPGKLPPQGIKQILEKKEGLFRMNMMGKRVNYAARSVISPDINIETNEIGVPPVFAKK
LTFPEFVTAHNFEHMHRLVCNGPHKHPGAVFVQDEDGTMISLDKTDEEGRRALANTLLHS
SGDAENSNNTSRPDIGLPSTRTRMRSKRVHRHLDDGDILILNRQPTLHKPSMMCHRARIL
KGEKTIRMHYANCNSYNADFDGDEMNMHFPQSLVAQSEARMIANNDNQYLVPTSGNPLRG
LIQDHVVSGVWMTNVDTFFNRDDYYQIIYGALRPEGNYSGQGRVITVPPAIWKPMPMWTG
KQLISTIMKNITPSDASGLNLSSSSKVRGKAWGSHVTEEMVLFMDGDLLQGVIDKSQIGA
SPYGLVHSVYDLYGAEVAGKLLGILSRLFTKFLQHRAFTCRMDDLQLTQRGDEMRSKLIS
ETSQRGIRATLSTIGLTEEEAQTPHGMIDLENRLQEVLRDDMKMAALDNAYSGENSSLQT
AINNQCLPAGLAKPFPWNNMQMMTSSGAKGTPVNASQISCLLGQQALEGRRVPVMVSGKT
LPSFRAFETAPRAGGFVAQRFLTGIRPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLIK
HLEGVRVHYDHTVRNSDSSILQFHYGDDSLDVTKQKHLYQFDFSLLNRSSLITRFNPSRI
ASEVDCTTASDYTDELLQAMENGKSPLPQPALSIYTPSRHFGSISEKFAKDVKQYQTSNP
LQVLKSRKSIRKKWPVYSQSNELVSMDLFRSLMHVRFMMGLVDPGEAVGLLAAQGVGEPS
TQMTLNTFHFAGHGAANVTLGIPRLREIVMTASANIKTPTMKFPIRAEVSDDEFERFIKK
TARLHLSQVVDEVLVTERLKKAGSSAQIFKVYDIRLQLYPADEYCSEYSINVPNVYKAIA
KVFVPTLERMINREMKTLQSDLKSQLAEIGKGKSSSGRKGQGNAEDGSEDGGEDVPARRA
DEADLEDGDAYDEKRARQREEVDYDKEGVESDSDAESEAMNDEKLRKMTGARKTRANQDS
DDETSSSSSSTTDSQDARLLEEQEISQADADELADEVQELSSYVTSAEFDRHGGHCQLSM
QFPSTAPKLLLVGLIEESCRRAVIQEIKGISRTLITKSDDNNKERRYGMTEGANLLAAWD
FGNNIIELSELYSNDINAMLKTYGVEAARSSIIKEISGVFDVYGISVDYRHLTVIADYMT
SEGRFKPFNRSGLANNVSPFLKASYETTATILTDATIFGDFDNLLNPSASIVLGQPPLTG
TNSFDVLLKT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggatccagctcatcccctactcaccaacatcacctcggtctcattctcgccacttctc
tcatcagacgtccgatcaatctcagtcctccagatcaccaatccgtccctactcgataac
aacaatgtcccctcgaccgcggggctgtacgaccccaggcttggaccaatcgattggaaa
gatatctgctggacctgccatcaacttaatacacaatgtcctggccattttgggcacatc
gaactcaatgtgcccgtcttccatccactcttcatgactcacgcctaccaccttttgagg
gcaacttgcttctattgccatcatttcctctgcactgaattgatcattcttcggtttact
gctaaactcaaacttctggaacatggcttaccactcgaatctgacgcgatagacgatttt
ccaacctcgcagcccatcaatgctggtaagagaggggcggaagaaggccccgatcaagaa
aacgaagacgctgaagcagatcaggcctcattcgacatcgctttctacaagaaatcaatc
tcgaaatttgtcagcgattgtttgaaccgagaagaaaaacccgtgatggctcgatgctct
ggtgaagattacaagatcggaatgtgcttcgatcgaaggcggcaagtcatatcagaacta
ttcaaactactgcccaagaagaagtgtgagagatgtggagccttctcgtcgcggatgagg
aaggacggacacacgaaaatcatggaatattctctcgttgccaagcaagaaaaatttcac
aagttgaccggtaaagtcagaccgaatgttctcaagttttcgaccgggtcaagcctcagt
cgacgttctgcttctgtgcaaccatcgaaccaaacaagcaaacgacagcggacagaccca
tcatccgcccacggtcaatcattcagcgatgtcaacagcgacgacggtgcttcggcctgg
gctcaaaactctcaacccgccagatcaaacttcggtgacgacgcttctgacagcgatgta
gctgaagttgctccaaaacggaaagtagtcagcatccgctcagaaaccgagagtgatgaa
aattctaatgatgatgacgatgatgatgatgatggtgatgatgacctaatcaagcaagat
acagccggcaagacaacaaagcagactgaacggatgatgatggctcaagaggctcgggca
catttacatcagcttttcatcaacgaaccggaaatttgtggattgttgtacggctcacgc
tatccagcagtacactcggatcgtcagcaagcgccggcatccgccgacatgttcttcctc
gaagttgtgcctgtgccaccttccaggttccgtccagccgctatgatgggcggtatgact
cttgaatcacctcaaaaccaactcttaacacaaatccttacgcagaccatcaagctccgc
gacttcaatagtgagctcgagaccacaagtcggaggctgaagctcgaaaaacacctcaat
gccaccgagatcgctgcactccaaaccactcgcgccaagctatatcgacaagtgctagaa
gcctgtgtcggcatgcaaatcgtggtcaacagtctgatggacagcaccaagaatccaact
tccatgggcccgggtaaactaccaccccaaggtatcaagcagattctcgaaaaaaaggag
gggctgttccgaatgaacatgatgggcaaacgagtgaactacgccgcgagatctgtaatc
tcacctgatatcaacatcgaaacaaatgagatcggagtacctccggtattcgctaaaaag
ctgacctttccagagtttgtcaccgcgcataactttgagcacatgcaccggttagtttgc
aatggtccacataagcaccctggcgcggttttcgttcaagatgaagacgggacaatgatc
tcattagacaaaacggacgaggaaggtcgacgagcgttagcaaacacattgctacattca
tctggtgacgccgagaattcgaacaatacgtcaaggcccgatattggtctaccatcgacc
cggacacgcatgcgcagcaaacgcgtacatcgtcacttggacgatggtgatatcctcatc
ttgaatcggcaaccaacccttcataaaccgagtatgatgtgtcaccgagcgaggattttg
aaaggcgagaagacgatacggatgcattatgcaaactgtaactcttacaatgctgatttt
gatggagatgagatgaacatgcatttccctcaaagcttggtcgcccaaagcgaggcgcga
atgatcgccaacaacgacaatcaatatttggtaccgacctcgggtaatcctttgcgtggc
ttgatccaagatcacgtagtatctggagtttggatgacgaatgtcgacaccttcttcaat
cgggatgattattatcaaattatttatggcgctctgagaccagaaggaaactactctggt
caaggtagagtcataaccgttccgccggctatctggaagcctatgccgatgtggactggc
aaacagctcatttcgaccatcatgaaaaatatcactccgagtgatgcatctggactcaac
ttgagctcttcctcaaaggtccgaggaaaagcgtggggcagtcatgtcacagaagaaatg
gtgctctttatggacggtgatctgcttcaaggagtgatcgataaatcacagatcggggct
tccccgtatggtctggtacattccgtttacgacttgtacggcgcggaggttgctggaaag
cttctgggaatcctcagtcgactgtttaccaaatttcttcaacatcgcgcattcacttgc
aggatggatgatctacagctcacccaacgaggggatgagatgcgctcgaagctcatttcg
gaaacttctcagcggggtatccgagctacgttgtcgaccataggactaacggaagaggaa
gcgcaaactccacacggtatgatcgatttggaaaaccgactgcaggaggtcttgagagat
gacatgaagatggcggcactcgacaatgcctacagcggagagaattcatcgctacaaaca
gctatcaataatcaatgccttcctgctggcctagcgaagcccttcccatggaataacatg
caaatgatgacttcatcgggtgcaaaaggtaccccagtcaatgcctctcaaatctcatgt
ttacttggtcaacaagcacttgaaggacgccgggtacccgtgatggtcagtggcaagaca
cttccgtcctttcgagcgtttgaaactgcaccacgggcgggtggatttgtcgctcaacgt
ttcttgactggtattcgtcctcaagagtactactttcactgtatggctggacgagagggt
ttgatcgacacagccgtcaaaactagtcgttcaggatatcttcaacgatgtctcatcaag
catcttgagggagtccgagttcactacgatcataccgtccggaacagcgattcttcaata
cttcagttccactatggagatgattcacttgacgtgacgaagcagaagcatctctaccaa
ttcgacttttctctgttgaatcgaagttcgttaatcacacgcttcaacccaagtcgaatc
gctagtgaagtggattgtaccactgcttctgactacaccgacgaactactccaggcgatg
gagaatgggaaatctccacttccacaacccgcgttatctatttatactccaagtcgacat
ttcggtagtatatcagaaaaattcgccaaagatgtcaaacaataccaaacttcgaacccg
ctccaagtcctgaaatctaggaaaagtattcgaaagaaatggcctgtttacagtcaatct
aacgagctcgtatccatggatctcttcaggtctttgatgcatgttcgcttcatgatggga
ctcgtcgatccaggagaggcggttggcttgttggccgcccagggtgttggagaaccctcg
acacagatgacattgaatactttccatttcgccggtcacggcgccgcgaatgtcactcta
ggtatcccacgtttacgtgaaatcgtgatgacagcctcggcaaacatcaagacccctacg
atgaaatttccgatacgagcggaggtatcggatgatgaatttgagcgattcatcaagaaa
acagcaaggctacatttatcacaagtggtcgatgaggtattggtaacagaacgattgaag
aaagctgggagcagcgcccaaatattcaaggtctacgatatcagattgcagctctatcca
gctgatgaatattgcagcgagtatagtatcaacgttccaaatgtttataaggcgatcgcc
aaggtctttgttcctactctagaacgaatgatcaaccgtgaaatgaaaacgctacaatcg
gatctgaaaagtcaacttgctgagatcgggaaaggcaagtcgagttcagggcggaaaggt
caaggaaacgctgaggatggtagtgaggatggtggagaggatgttccagctcgaagagcg
gatgaggcagatcttgaagatggagatgcatatgatgaaaaacgagcgcgtcaaagggaa
gaagttgactatgataaggagggagtcgaatcagattcagatgcggaatccgaggcaatg
aatgacgaaaagctacgaaagatgacgggtgctcgtaaaactcgcgcaaatcaagatagc
gacgatgagacgtcgtcctcgtcgtcaagtaccaccgattctcaagacgctcgacttctt
gaagaacaggaaatttctcaggctgacgctgacgaacttgcagacgaggttcaagagcta
tcaagctatgtcacttcggccgagtttgataggcatggtggtcattgtcagctatcaatg
cagtttccatcaactgcacccaaattgctattggtaggattgatcgaagagagttgtaga
cgagcagtgatccaagaaattaaggggatcagtcgaactttaattaccaaatctgatgat
aataataaagagagaagatatggtatgaccgaaggcgcaaacttattagccgcatgggat
ttcggtaacaatattatcgagttatctgaattgtattctaacgatatcaatgctatgctc
aagacttacggcgtcgaggccgctagatcctctatcattaaagaaatctcaggcgtcttt
gacgtttatggtatctctgttgattatcgacatttaacggtcattgccgactatatgaca
tctgaaggacgatttaaaccgttcaacagatcaggactagcaaacaatgtttcacctttc
ctaaaagcttcatatgaaaccaccgcgaccatcttgaccgacgcgaccatctttggcgat
ttcgataacctactcaatccttcagcctccatcgtcttgggccagcctccactgaccggt
actaactcctttgatgtccttcttaaaacttga
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integrated database retrieval system
