Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_018930
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Entry
Pst134EA_018930 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_018930
03036 Chromosome and associated proteins [BR:
pstr03036
]
Pst134EA_018930
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Pst134EA_018930
Chromosome and associated proteins [BR:
pstr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
Pst134EA_018930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_9
HHH_3
SH2
S1
Motif
Other DBs
NCBI-GeneID:
72030216
NCBI-ProteinID:
XP_047802846
LinkDB
All DBs
Position
10:complement(131988..138244)
Genome browser
AA seq
1530 aa
AA seq
DB search
MGQTTTTNTHSRPYIHQRLSKIDKSMEKTNADDVGQTEEPNEAVEEDEGVQNGLDDSSEE
EEEGSEEERAVREGFIADEDEEDAESEDEDRSSRKRKRKHRHRHKHSDRKKHRSTANDDD
EDNDLDEDDLELLAENTGVPTHRKAKRRLRRAGSVASDNIDQDVEDDLHRIFDDEDDGFE
ASARPRDALGGDDLDDFIEEDEFPEDEHSNLPSKASKRKDKNARPSQAGRQKQAGRLMGA
LAPDVTDITKESWDEVIEVFGNGDDYTWALEIEENTDFHLDGGDPGLDGEDTQAKSTAIQ
LKDIFEPSEIKERMLTEADEAIRQLDIPERTQLASAGLTNINATEPILGAEELELAAEWV
AQRISQRCNESFLQPDRHGFAPLLKQHFLVAVKDVLDFFLSKYFEVPFVFMRRQDYINYH
DPQGHDTQNRDIRFLTRDELWKAHTLALKYVALLERKKGLKRLFDKLGTEDDYFQECFLG
IQSVEEVADLMQWLTLTYGHRLRDAQADVREDADALAELDAEGLSGPAADAKKAVRYKKA
LRESRYERAKSTNINHLSKEIGISARQLTVNFLSREKVHQKENPPLHPLSYAETYCDPET
EFEEPKKAIEAAKFVISTDVGRDPLLKKHVRHLFQNHGVVTVTPTESGMHKINELHPYFA
FKYLSQKPFSALKHSPQYLQIMAAEQELLVNVQVHLNPQTDHDFKKELIGMFKSDDPSDD
SAKWNELREEILMYAIEHMLLPDAARWAKNYLKDEAEEYVAQKCADELEFRADVAPFRPS
HLFDGEVPSVVAISNGAGDPKRDSVFVIFLDTAGRFRDHMKLDNLRDPVPRQAFSEFLQK
RAPDVIVVGGFSASTYRLLGDVKTISGELSERMKSELQNATGELTTEAASKLDYPVIVAR
DDTARLNQHGKRAEEEFGELPPLGRYCVALARYVQSPLNEYAAAASDLTAISFHPDQQFL
PKDTLQLYLERALVNIVNAVGVDINRAVNDHYYQCLLQYVCGLGPRKAQKLIKSINTSAI
EGTLSLRNQLVTENLVTKNIFYNCAGFLRIKQEDLRANLDPDILDDTRIHPEDYDVARKM
AADAQELDEEDLTEQPPSQVVIDLLAADSGKGVAKLDDLNLDDFAEMLTQMMGTKKRLTL
YQIRSELQHPYQETRAKFEPLTPEQMFDLWTGENEATLSQGAIIPVKIIKVRDRGLAVRL
DSGIEGFIGQNYMVDEGTPDMSRFPVGSTTQAVVVEIHKDRFSVELNSQPKYVAANSTYR
KKVETDQYFDHQQMEIDRDQAETTKKKGSRRTQRVIKHPNFHNFNAGQAEQHLANLQRGD
CVIRPSSRGTDHLAVTWKVDTGIYQHIDVLELDKPNEFSLGRILKIGGRYSYSDLDELIV
SHVRAMARKVEEMIQHEKYKGSYDDMSNFLKTYLMANPDRSTYAFCIDKEVAGNFLIGFK
ANKNSPMQTWNVKVSPGAYELHGTQAGDMLSLCNAFKTQYTARAAAAMAAGHGGRSEIYG
RQTPSLAPNGRTPIHGGRTPMLTNRTPPCW
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaacaactacaacaaacactcatagcagaccatacatccaccagcgcctctct
aagatcgataagtcgatggaaaaaacgaatgcagatgacgtagggcagacagaggaacca
aacgaagccgtggaggaagatgaaggcgtgcagaacggactcgatgacagtagcgaagaa
gaagaagaggggagtgaggaagagagggcagtacgtgaaggtttcattgccgatgaggat
gaagaggacgctgagtcagaggacgaagatcgctcctcacgaaagcgaaagcgcaagcat
cgccatcgacataagcattcagaccgcaaaaagcatcgctctactgccaacgatgacgac
gaagacaacgatctggacgaagatgatctggaacttttagctgagaacacgggagttcca
acacataggaaggctaagagacgattgcgacgcgcgggatccgtagcctctgacaacatc
gatcaagatgttgaagatgatttgcatcggatttttgatgacgaagatgacggatttgaa
gcttccgctcgccctcgtgacgcgcttggtggagatgatctggacgacttcattgaagag
gacgaattccccgaagacgagcactcaaacttaccatcgaaagccagtaaaaggaaagac
aagaatgcccgcccttctcaagcgggccgccaaaaacaggcgggtcgtctgatgggcgcc
ctggctcccgatgtcacagatataacgaaagaatcatgggatgaagtcatcgaagttttc
ggcaatggcgatgattacacttgggccctagagatcgaggagaatacagattttcatttg
gatggcggtgatccagggttagatggcgaggatactcaggccaagagcacggccatccaa
ctgaaggatattttcgaacctagtgaaatcaaggagcgtatgctgactgaagccgatgaa
gcgattagacaactcgacatacctgagcgcactcaactcgcttctgctggattaacgaac
atcaatgcgactgagccaatacttggagcagaagagcttgagctcgctgccgaatgggtg
gcacaaaggatttcccaacgatgcaacgaatccttcttgcaacccgatcgacatggtttt
gcacctctactgaaacaacacttcctcgttgccgtgaaggatgttttagatttttttctc
agcaaatacttcgaagttccttttgttttcatgcgccgacaagactatatcaactaccat
gaccctcaaggtcatgatacccaaaatcgagatatacgcttcctaacccgtgatgaacta
tggaaagcccacacacttgccctgaagtatgtcgctctactcgagcgtaagaagggtctc
aaacgactttttgacaaactcggtactgaagatgattactttcaagagtgcttcttaggc
attcaatctgttgaagaagttgctgacctgatgcagtggctaaccttgacgtacggtcat
cgactgcgtgatgcacaagctgatgttcgagaagacgctgacgcattggccgaactcgat
gctgaaggtctcagtggacctgccgctgacgccaagaaagccgtcagatataagaaggcg
ctccgtgaaagtcggtatgaacgtgccaaaagtaccaacattaatcacctttccaaagag
attggcatctctgcacgtcaattaaccgtcaacttccttagtcgcgagaaggttcatcag
aaggaaaacccgcccctacatccactttcgtacgccgaaacgtattgcgatccggagacc
gagttcgaagaacctaagaaagcaattgaggcggccaaattcgttatcagcaccgacgtt
gggcgcgatccattactcaaaaagcatgttaggcatttatttcagaaccacggagtagta
accgtaacgccgactgagagtggaatgcacaagatcaacgaacttcatccctacttcgcc
ttcaaatatctcagtcagaagccattctcggctttgaaacactcgcctcaatacctccaa
atcatggccgctgaacaagagttgctcgtcaatgtacaagtacacctgaatcctcaaacc
gatcacgatttcaagaaagagttgattggcatgttcaagtcggatgacccgtctgacgac
tcggcgaaatggaatgaacttcgagaagagattttaatgtacgcgatcgaacatatgctg
ctaccggatgcagcccgttgggccaaaaactacttaaaggatgaagctgaggaatatgtg
gcacagaagtgcgctgatgaacttgagtttcgtgcagatgtagcgcctttccgcccaagt
catctattcgacggtgaagtcccctcggtggtcgctatctccaacggagcgggtgatccc
aagcgtgattctgtttttgtgatcttcttggacacagcagggcgattccgggatcacatg
aaactggacaatctccgcgatcctgttccacgccaagctttctcggaatttctccaaaag
cgagcgccagacgtcatcgtcgttggtgggttcagcgcatctacctatcgactactgggg
gacgtcaagaccatctctggtgaattgtctgagcgcatgaaatccgaattgcaaaacgcg
acaggggaattgactaccgaggccgccagtaaactagattatcctgtcatcgtggctaga
gacgacaccgcgagattgaaccagcatggcaaacgggctgaagaggagtttggagaacta
ccacctcttggaaggtattgcgttgccttggctcgatacgtccagagcccattaaacgaa
tacgctgctgctgcatcagatctcactgcgatatccttccaccccgatcagcaattcctg
ccaaaagacactcttcaactatatttagaacgagctctggtcaacattgtgaatgctgtc
ggcgtggacatcaacagggccgtgaacgaccattattatcaatgtctcttacaatatgta
tgtggacttggcccgcgaaaagcccaaaagttgatcaagtcaatcaacaccagcgcgatt
gaaggtaccctgagcttgaggaatcaattggtcactgagaacttggtgaccaaaaacatc
ttttacaattgtgccggattcttacgaatcaagcaagaggatctacgtgccaatctcgac
cctgatattttggatgatacgagaatacatcctgaagactacgacgtcgcacgcaaaatg
gcggctgatgctcaagaactggatgaagaggatcttaccgagcagcctccatcacaagta
gtcattgatttgttggctgctgacagcggtaagggggtggcgaaattggatgacctcaat
ctagatgattttgctgagatgcttactcaaatgatgggcaccaaaaaaaggctgacgctc
tatcaaattagatctgagctgcaacacccgtatcaggaaactcgagccaagtttgaaccc
ttgacacccgagcagatgttcgatctctggacaggcgaaaatgaagcgaccctctcccaa
ggagcaatcataccggtcaaaatcatcaaggtccgtgatcgtggactagccgtccggtta
gattccggaatcgagggcttcattggtcagaattacatggtcgacgaagggacgcccgat
atgagtagattcccagttgggtcgacaacccaggcggtggtcgtagaaattcacaaggac
cgtttctcggtcgaactcaattctcaaccgaaatacgtcgcggctaactcgacatataga
aagaaagtagagaccgatcagtatttcgatcaccaacagatggaaatcgacagagatcaa
gctgaaacaaccaaaaaaaaaggtagtcgccggactcagagggtcatcaagcatcccaac
ttccataatttcaatgctgggcaagctgagcagcaccttgcaaacttgcaacggggggac
tgtgtgatccggcctagctctaggggtactgatcacttggctgttacgtggaaggtggat
acgggcatctatcaacatattgacgtgctggagctcgacaaacccaacgagttctcactc
ggaagaattttgaagattggaggccgatactcgtattcagatctcgacgagttgatcgta
tctcatgtcagggcgatggcacggaaagtcgaagaaatgatccaacatgaaaaatacaaa
ggaagctatgatgacatgtctaattttctgaagacttacttgatggccaatcccgatcgc
tcaacttatgcattttgcattgacaaagaggtggctggaaatttcttgatcggattcaaa
gccaacaagaattctccgatgcagacttggaacgtaaaggtatcgcctggggcatatgaa
ctgcatggcactcaagctggagatatgctgtctctatgcaatgccttcaagacccaatac
accgcgcgagcagcggctgcaatggctgctgggcatggaggcagatccgaaatctatggt
cgtcaaacgccatcccttgcccccaatggacgtaccccgatccatggcggtcgcactcca
atgctcaccaaccgtacccccccttgttggtag
DBGET
integrated database retrieval system
