Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_019137
Help
Entry
Pst134EA_019137 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Pst134EA_019137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pstr03041
]
Pst134EA_019137
03009 Ribosome biogenesis [BR:
pstr03009
]
Pst134EA_019137
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Pst134EA_019137
Spliceosome [BR:
pstr03041
]
Complex A
U2 snRNP components
U2 related factors
Pst134EA_019137
Complex B
Pst134EA_019137
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
Pst134EA_019137
Ribosome biogenesis [BR:
pstr03009
]
Eukaryotic type
90S particles
Helicases
Pst134EA_019137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
SRP54
Flavi_DEAD
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
72030423
NCBI-ProteinID:
XP_047803056
LinkDB
All DBs
Position
10:947438..950689
Genome browser
AA seq
759 aa
AA seq
DB search
MGTEKENPYLAHLPSESQSNALDGFIPRKATGKQVLEAMDHPKNPFTGQRYSQQYKTILD
QRKGLPVFKQMPEFYRMYNKSQFVVMEGETGSGKTTQIPQYAVYGDLPHMKNKQIACTQP
RRVAAMSVAKRVADEMDVKLGEEVGYSIRFEDCTSSKTILKYMTDGMLLREALHDNTLSR
YSTLILDEAHERTLATDILMGLLKDIAKRRPDLKIIVMSATLDAAKFQNYFNSAPLLKVP
GRTFPVETFYTPEPEPDYLEAAIRTVLMIHRDEQPGDILVFLTGEEEIEDACRKISIEVD
QLLQTSSLVGPLKCVPLYSSLPPQQQQRIFDPPPPPLTPNGPPGRKVVISTNIAETSLTI
DGIVYVIDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTENSF
VKELEDQTYPEILRSNLASVVLELKKLGVNDLVHFDYMDPPAPETVIRALELLNYLAAFD
DDGNLTPLGEIMAEFPLDPQLSKMLISSPEFKCSNEILSIAAMLSVPNPFLRPHNQRKEA
DDARAQFTHPEGDHLTLLNLFHAYKSSQDPNNWCWQNYVANRAMLQADNVRNQLKRTMER
FDLDMISIDHKHKDYFKNIRMAITTGYFMQVAHKEREKGVYTTRDGQMVGLHPSSGIDNS
PEWVLYNEFVLTTRNFIRICTEVKAEWLLDFAPLYYDVDTMPDGEAKRALQRIVAKKTHH
SSSSSKRIDNDQDPESKARKRQRKLDKKSKDSSATPTAT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgaaaaggaaaacccctacttggctcatctaccaagcgagtctcaatcgaac
gcactcgatggcttcattcccagaaaagcgactggaaaacaagtactcgaggccatggat
caccccaaaaacccgttcactggtcaacgttactcgcaacagtataagactatactcgat
caacgaaagggtttgcccgtcttcaaacagatgccagaattttatcggatgtataataag
agtcaatttgtggtaatggaaggtgaaaccggatcaggaaaaactactcaaataccacaa
tatgcggtttatggtgatctaccacacatgaaaaacaaacagattgcttgtactcaacct
agacgagtagcagctatgagtgttgcaaaacgtgtggctgatgaaatggacgttaaactt
ggagaggaagttggttatagcattcgatttgaagattgtactagttcaaaaactattctg
aagtatatgaccgatggtatgttgctaagagaggcactccatgataacacgctttcgcgt
tattcgaccttaatcttggacgaagctcacgaacgtacccttgcaacggatatcttgatg
ggtctattgaaagatatcgcaaaacgaagaccagatctaaagataatagtcatgtcagca
acactagatgccgccaaatttcaaaattatttcaattcagcaccattattgaaagttcca
ggaagaaccttcccagtcgaaacgttttacacaccagaacctgaaccagattatttagaa
gcagccatacgtacggtattaatgatacacagagatgaacaacctggtgatatcttagtg
tttcttactggtgaagaagagatcgaagatgcttgtagaaagattagtatagaagtcgat
caactactccaaacttcttctctggttggtccattgaaatgcgtgccattatactcatcg
ctacctcctcaacaacaacagagaatctttgatcctccacccccaccactaacccccaat
ggaccacccggtagaaaagtagtaatctctaccaacatagctgaaacttctctaacgatc
gacgggatcgtttatgtgatcgatcctggattctctaaacagaaaatctataacccaagg
atcagagtggaatccttactagtatctcctatctctaaagcttctgcacagcaaagggct
ggtcgggcagggcgaactagacctggcaaatgtttcagattatacactgaaaatagcttt
gttaaagaattagaagatcaaacttacccggaaatcttacgatcaaatttagcaagtgta
gtcttagaattgaagaaattaggagtcaacgatctagtgcatttcgattatatggaccca
cctgcacccgaaacagttatcagagccttagaactattgaactatctagccgcttttgac
gatgatggtaatctaactccactgggtgaaatcatggctgaatttccactagatcctcaa
ctttctaagatgttaatctcgagtcctgaatttaaatgtagtaatgaaatcctaagtatt
gctgctatgttatctgtgcctaatcctttccttcgccctcataatcagcgtaaggaagcc
gatgatgctagggctcaattcactcatccagagggagatcatctcacgcttttaaactta
ttccatgcatacaaaagtagccaagatccgaacaattggtgttggcaaaattacgtagca
aatcgagcaatgttacaagccgacaatgtacgaaatcaattgaagagaacaatggaaagg
ttcgatttagatatgatttcgatcgatcataaacataaagattattttaagaatatcaga
atggctatcacgactggttatttcatgcaagttgcacataaagaacgtgagaagggtgtc
tatactactagggacggtcagatggttggcttgcatcctagctctggtatcgataatagt
cccgaatgggtgctttataatgagttcgtcttgaccacacggaatttcattaggatatgt
acagaggttaaagcggaatggttattggatttcgctccattatattacgacgtagatacg
atgccagatggggaagctaaaagagccctacaaaggatagtcgccaaaaaaactcatcac
tcttcttcttcttctaagaggatcgataatgatcaggatccggaatccaaagcgaggaaa
cgtcaacgcaaattggataaaaaatctaaagactcttctgctactcctaccgcaacttga
DBGET
integrated database retrieval system
